SB03G042090 (Sorghum bicolor)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 Sb03g042090 T20277_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Sb03g042090.1 KH 144 202

Links

Other KH family RBPs
Other Sorghum bicolor RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002892469.1 Arabidopsis lyrata fgenesh2_kg.1__1021__AT1G09660.1 N 0.800
XM_002867517.1 Arabidopsis lyrata fgenesh2_kg.7__1597__AT4G26480.1 N 0.754
XM_002864390.1 Arabidopsis lyrata fgenesh2_kg.8__1516__AT5G56140.1 N 0.710
AT1G09660 Arabidopsis thaliana AT1G09660-TAIR-G N 0.800
AT4G26480 Arabidopsis thaliana AT4G26480-TAIR-G N 0.783
AT5G56140 Arabidopsis thaliana AT5G56140-TAIR-G N 0.710
BRADI2G57220 Brachypodium distachyon BRADI2G57220 N 0.885
Cucsa.114230 Cucumis sativus Cucsa.114230 N 0.831
chr3.CM0047.410.nc Lotus japonicus chr3.CM0047.410.nc N 0.721
cassava13306.valid.m1 Manihot esculenta cassava13306.valid.m1 N 0.797
cassava412.valid.m1 Manihot esculenta cassava412.valid.m1 N 0.733
cassava411.valid.m1 Manihot esculenta cassava411.valid.m1 N 0.733
cassava410.valid.m1 Manihot esculenta cassava410.valid.m1 N 0.733
cassava13904.valid.m1 Manihot esculenta cassava13904.valid.m1 N 0.800
cassava13307.valid.m1 Manihot esculenta cassava13307.valid.m1 N 0.797
Medtr2g005410 Medicago truncatula Medtr2g005410 N 0.864
BGIOSIBCE019075 Oryza indica BGIOSIBCE019075 N 0.862
BGIOSIBCE004530 Oryza indica BGIOSIBCE004530 N 0.967
LOC_Os05g34670 Oryza sativa LOC_Os05g34670 N 0.862
LOC_Os01g66300 Oryza sativa LOC_Os01g66300 N 0.967
estExt_fgenesh1_pm.C_2690009 Physcomitrella patens estExt_fgenesh1_pm.C_2690009 N 0.797
estExt_Genewise1.C_2260018 Physcomitrella patens estExt_Genewise1.C_2260018 N 0.754
e_gw1.23.297.1 Selaginella moellendorfii e_gw1.23.297.1 N 0.729
GSVIVG00023231001 Vitis vinifera GSVIVG00023231001 N 0.836
GRMZM2G125531 Zea mays GRMZM2G125531 N 0.937