gw1.1.562.1 (Micromonas pusilla)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 gw1.1.562.1 T21248_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.1.562.1 KH 137 188

Links

Other KH family RBPs
Other Micromonas pusilla RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AMAG_07778 Allomyces macrogynus AMAG_07778 N 0.736
AMAG_09721 Allomyces macrogynus AMAG_09721 N 0.736
estExt_fgenesh1_pg.C_70293 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_70293 N 0.717
PK22510.1 Cannabis sativa PK22510.1 N 0.717
estExt_Genewise1Plus.C_70089 Capitella teleta estExt_Genewise1Plus.C_70089 N 0.717
pasa_Sanger_mRNA6968 Chlamydomonas reinhardtii pasa_Sanger_mRNA6968 N 0.736
estExt_fgenesh3_pg.C_140192 Chlorella NC64A estExt_fgenesh3_pg.C_140192 N 0.736
CNBG_5932 Cryptococcus neoformans CNBG_5932 N 0.755
Chro.30334 Cryptosporidium hominis Chro.30334 N 0.712
cgd3_2950 Cryptosporidium parvum cgd3_2950 N 0.712
CMR456C Cyanidioschyzon merolae CMR456C N 0.712
EDP43963.1 Malassezia globosa EDP43963.1 N 0.774
e_gw1.1.604.1 Mucor circinelloides e_gw1.1.604.1 N 0.717
eugene.0700010461 Ostreococcus lucimarinus eugene.0700010461 N 0.868
e_gw1.7.303.1 Ostreococcus RCC809 e_gw1.7.303.1 N 0.887
e_gw1.07.00.268.1 Ostreococcus tauri e_gw1.07.00.268.1 N 0.887
e_gwh2.2.654.1 Phanerochaete chrysosporium e_gwh2.2.654.1 N 0.736
e_gw1.10.100.1 Phycomyces blakesleeanus e_gw1.10.100.1 N 0.717
estExt_fgenesh3_pm.C_180006 Postia placenta estExt_fgenesh3_pm.C_180006 N 0.736
PTSG_07198 Salpingoeca rosetta PTSG_07198 N 0.736
SPPG_02913 Spizellomyces punctatus SPPG_02913 N 0.755
estExt_Genewise1Plus.C_20041 Sporobolomyces roseus estExt_Genewise1Plus.C_20041 N 0.737
e_gw1.7.291.1 Tremella mesenterica e_gw1.7.291.1 N 0.736
UM03241 Ustilago maydis UM03241 N 0.717
estExt_fgenesh4_pg.C_90052 Volvox carteri estExt_fgenesh4_pg.C_90052 N 0.736