CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Chro.30334
(
Cryptosporidium hominis
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
Chro.30334
T20339_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Chro.30334
KH
154
202
VKRRQRLVGPNGSTLKAIELLTNCYVLVQGQTVSVIGSYKSLKLVRRIV
Links
Other
KH
family RBPs
Other
Cryptosporidium hominis
RBPs
121 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
cgd3_2950
Cryptosporidium parvum
cgd3_2950
N
1.000
CMU_000450
Cryptosporidium muris
CMU_000450
N
0.878
CNBG_5932
Cryptococcus neoformans
CNBG_5932
N
0.840
eu2.Lbscf0025g00750
Laccaria bicolor
eu2.Lbscf0025g00750
N
0.840
Genemark.4150_g
Heterobasidion annosum
Genemark.4150_g
N
0.820
fgenesh2_kg.4_#_366_#_2882_1_CFPN
Serpula lacrymans
fgenesh2_kg.4_#_366_#_2882_1_CFPN
N
0.820
fgenesh1_pm.C_scaffold_4000135
Pleurotus ostreatus
fgenesh1_pm.C_scaffold_4000135
N
0.820
AMAG_09721
Allomyces macrogynus
AMAG_09721
N
0.820
CC1G_09940
Coprinopsis cinerea
CC1G_09940
N
0.820
e_gw1.1.3483.1
Schizophyllum commune
e_gw1.1.3483.1
N
0.820
AMAG_07778
Allomyces macrogynus
AMAG_07778
N
0.820
estExt_fgenesh2_kg.C_20554
Agaricus bisporus
estExt_fgenesh2_kg.C_20554
N
0.800
TGGT1_008040
Toxoplasma gondii
TGGT1_008040
N
0.800
NCLIV_025560
Neospora caninum
NCLIV_025560
N
0.800
TGVEG_072780
Toxoplasma gondii
TGVEG_072780
N
0.800
TGME49_062070
Toxoplasma gondii
TGME49_062070
N
0.800
e_gwh2.2.654.1
Phanerochaete chrysosporium
e_gwh2.2.654.1
N
0.800
Medtr5g094630
Medicago truncatula
Medtr5g094630
N
0.780
EDP43963.1
Malassezia globosa
EDP43963.1
N
0.780
PGUG_03304
Candida guilliermondii
PGUG_03304
N
0.780
SPPG_02913
Spizellomyces punctatus
SPPG_02913
N
0.780
e_gw1.07.00.268.1
Ostreococcus tauri
e_gw1.07.00.268.1
N
0.780
e_gw1.7.291.1
Tremella mesenterica
e_gw1.7.291.1
N
0.780
estExt_fgenesh3_pm.C_180006
Postia placenta
estExt_fgenesh3_pm.C_180006
N
0.780
UM03241
Ustilago maydis
UM03241
N
0.780
KLLA0C00506g
Kluyveromyces lactis
KLLA0C00506g
N
0.780
e_gw1.7.303.1
Ostreococcus RCC809
e_gw1.7.303.1
N
0.780
TP02_0631
Theileria parva
TP02_0631
N
0.776
PTSG_07198
Salpingoeca rosetta
PTSG_07198
N
0.760
PredSwiss_ASS2010_156.1
Pneumocystis carinii
PredSwiss_ASS2010_156.1
N
0.760
estExt_fgenesh1_pg.C_chr_50346
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_50346
N
0.760
estExt_Genewise1Plus.C_250151
Melampsora laricis populina
estExt_Genewise1Plus.C_250151
N
0.760
estExt_fgenesh3_pg.C_140192
Chlorella NC64A
estExt_fgenesh3_pg.C_140192
N
0.760
eugene.0700010461
Ostreococcus lucimarinus
eugene.0700010461
N
0.760
pasa_Sanger_mRNA6968
Chlamydomonas reinhardtii
pasa_Sanger_mRNA6968
N
0.760
e_gw1.1.604.1
Mucor circinelloides
e_gw1.1.604.1
N
0.760
e_gw1.10.100.1
Phycomyces blakesleeanus
e_gw1.10.100.1
N
0.760
CMR456C
Cyanidioschyzon merolae
CMR456C
N
0.755
EDO06615.1
Babesia bovis
EDO06615.1
N
0.755
CLUG_04903
Candida lusitaniae
CLUG_04903
N
0.740
dbe
Drosophila melanogaster
FBgn0020305
N
0.740
GG24622
Drosophila erecta
FBgn0116754
N
0.740
GA18062-RA
Drosophila pseudoobscura
FBgn0078070
N
0.740
GL18627
Drosophila persimilis
FBgn0156228
N
0.740
GE15854
Drosophila yakuba
FBgn0233416
N
0.740
RO3G_15602
Rhizopus oryzae
RO3G_15602
N
0.740
GK24616
Drosophila willistoni
FBgn0226576
N
0.740
SAKL0C00484g
Lachancea kluyveri
SAKL0C00484g
N
0.740
DEHA0E14685g
Debaryomyces hansenii
DEHA0E14685g
N
0.740
GJ19628
Drosophila virilis
FBgn0206770
N
0.740
GI18007
Drosophila mojavensis
FBgn0140747
N
0.740
MDP0000221204
Malus x domestica
MDP0000221204
N
0.740
2217_YCL059C
Saccharomyces paradoxus
2217_YCL059C
N
0.740
2245_YCL059C
Saccharomyces mikatae
2245_YCL059C
N
0.740
Skud_Contig2065.14
Saccharomyces kudriavzevii
Skud_Contig2065.14
N
0.740
KRR1
Saccharomyces cerevisiae
YCL059C
N
0.740
e_gw1.11.691.1
Mycosphaerella fijiensis
e_gw1.11.691.1
N
0.740
estExt_fgenesh1_pg.C_70293
Batrachochytrium dendrobatidis
estExt_fgenesh1_pg.C_70293
N
0.740
mis3
Schizosaccharomyces pombe
SPBC25B2.05
N
0.740
2380_YCL059C
Saccharomyces bayanus
2380_YCL059C
N
0.740
MDP0000130613
Malus x domestica
MDP0000130613
N
0.740
Cd36_10710
Candida dubliniensis
Cd36_10710
N
0.735
GLRG_02756
Colletotrichum graminicola
GLRG_02756
N
0.735
LELG_00899
Lodderomyces elongisporus
LELG_00899
N
0.735
e_gwh1.2.1.2136.1
Pichia stipitis
e_gwh1.2.1.2136.1
N
0.735
CPAG_00706
Candida parapsilosis
CPAG_00706
N
0.735
XP_002158002.1
Hydra magnipapillata
XP_002158002.1
N
0.735
KRR1
Candida albicans
orf19.661
N
0.735
CTRG_04103
Candida tropicalis
CTRG_04103
N
0.735
Kwal_13011
Kluyveromyces waltii
Kwal_13011
N
0.720
KRR1
Erinaceus europaeus
ENSEEUG00000001466
N
0.720
Hrb2
Rattus norvegicus
ENSRNOG00000004035
N
0.720
Krr1
Mus musculus
ENSMUSG00000063334
N
0.720
KRR1
Loxodonta africana
ENSLAFG00000015986
N
0.720
KRR1
Takifugu rubripes
ENSTRUG00000004380
N
0.720
AGAP007912
Anopheles gambiae
AGAP007912
N
0.720
XM_846783.1
Canis familiaris
ENSCAFG00000005665
N
0.720
estExt_Genewise1Plus.C_20668
Chlorella vulgaris
estExt_Genewise1Plus.C_20668
N
0.720
A7TFC5_VANPO
Vanderwaltozyma polyspora
A7TFC5_VANPO
N
0.720
estExt_Genewise1.C_20589
Coccomyxa C 169
estExt_Genewise1.C_20589
N
0.720
GSPATP00022892001
Paramecium tetraurelia
GSPATP00022892001
N
0.720
Ame_R008803
Ailuropoda melanoleuca
Ame_R008803
N
0.720
gw1.3.2120.1
Cryphonectria parasitica
gw1.3.2120.1
N
0.720
estExt_Genewise1Plus.C_70089
Capitella teleta
estExt_Genewise1Plus.C_70089
N
0.717
3707.m00252
Tetrahymena thermophila
3707.m00252
N
0.714
gw1.1.562.1
Micromonas pusilla
gw1.1.562.1
N
0.712
XP_002489989.1
Pichia pastoris
XP_002489989.1
N
0.712
PHATRDRAFT_45441
Phaeodactylum tricornutum
Phatr45441
N
0.706
XP_001186312.1
Strongylocentrotus purpuratus
XP_001186312.1
N
0.706
XP_786725.1
Strongylocentrotus purpuratus
XP_786725.1
N
0.706
ZYRO0F18458g
Zygosaccharomyces rouxii
ZYRO0F18458g
N
0.706
KRR1
Sus scrofa
ENSSSCG00000000520
N
0.700
KRR1
Pteropus vampyrus
ENSPVAG00000000529
N
0.700
KRR1
Sorex araneus
ENSSARG00000009967
N
0.700
KRR1
Spermophilus tridecemlineatus
ENSSTOG00000003620
N
0.700
KRR1
Tarsius syrichta
ENSTSYG00000009394
N
0.700
XR_025480.1
Pan troglodytes
ENSPTRG00000005238
N
0.700
KRR1
Tupaia belangeri
ENSTBEG00000008145
N
0.700
KRR1
Tursiops truncatus
ENSTTRG00000001661
N
0.700
BDBG_00628
Blastomyces dermatitidis
BDBG_00628
N
0.700
KRR1
Choloepus hoffmanni
ENSCHOG00000009636
N
0.700
LOC100407700
Callithrix jacchus
ENSCJAG00000001181
N
0.700
KRR1
Cavia porcellus
ENSCPOG00000014353
N
0.700
KRR1
Danio rerio
ENSDARG00000011246
N
0.700
KRR1_BOVIN
Bos taurus
ENSBTAG00000011591
N
0.700
FGSG_06203
Fusarium graminearum
FGSG_06203
N
0.700
EIN_288540
Entamoeba invadens
EIN_288540
N
0.700
estExt_fgenesh2_pg.C_210023
Monosiga brevicollis
estExt_fgenesh2_pg.C_210023
N
0.700
Pc15g00270
Penicillium chrysogenum
Pc15g00270
N
0.700
KRR1
Dasypus novemcinctus
ENSDNOG00000015614
N
0.700
Krr1
Dipodomys ordii
ENSDORG00000004614
N
0.700
KRR1
Macaca mulatta
ENSMMUG00000009640
N
0.700
KRR1
Oryctolagus cuniculus
ENSOCUG00000003925
N
0.700
KRR1
Otolemur garnettii
ENSOGAG00000010313
N
0.700
KRR1
Ochotona princeps
ENSOPRG00000011858
N
0.700
KRR1
Gorilla gorilla
ENSGGOG00000013596
N
0.700
KRR1
Gasterosteus aculeatus
ENSGACG00000019481
N
0.700
LOC100050169
Equus caballus
ENSECAG00000017498
N
0.700
KRR1
Felis catus
ENSFCAG00000005207
N
0.700
KRR1
Homo sapiens
ENSG00000111615
N
0.700
ENSPPYG00000004785
Pongo pygmaeus
ENSPPYG00000004785
N
0.700