CMR456C (Cyanidioschyzon merolae)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 CMR456C T17973_0.6 Cyanidioschyzon merolae Genome Project (2008-Jan-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CMR456C KH 158 205

Links

Other KH family RBPs
Other Cyanidioschyzon merolae RBPs

84 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
UM03241 Ustilago maydis UM03241 N 0.800
estExt_fgenesh3_pg.C_140192 Chlorella NC64A estExt_fgenesh3_pg.C_140192 N 0.800
SPPG_02913 Spizellomyces punctatus SPPG_02913 N 0.800
pasa_Sanger_mRNA6968 Chlamydomonas reinhardtii pasa_Sanger_mRNA6968 N 0.780
estExt_fgenesh1_pg.C_70293 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_70293 N 0.780
CMU_000450 Cryptosporidium muris CMU_000450 N 0.771
e_gwh2.2.654.1 Phanerochaete chrysosporium e_gwh2.2.654.1 N 0.760
e_gw1.1.604.1 Mucor circinelloides e_gw1.1.604.1 N 0.760
estExt_fgenesh2_pg.C_210023 Monosiga brevicollis estExt_fgenesh2_pg.C_210023 N 0.760
EDP43963.1 Malassezia globosa EDP43963.1 N 0.760
AMAG_07778 Allomyces macrogynus AMAG_07778 N 0.760
AMAG_09721 Allomyces macrogynus AMAG_09721 N 0.760
e_gw1.7.303.1 Ostreococcus RCC809 e_gw1.7.303.1 N 0.760
e_gw1.7.291.1 Tremella mesenterica e_gw1.7.291.1 N 0.760
e_gw1.07.00.268.1 Ostreococcus tauri e_gw1.07.00.268.1 N 0.760
cgd3_2950 Cryptosporidium parvum cgd3_2950 N 0.755
Chro.30334 Cryptosporidium hominis Chro.30334 N 0.755
e_gwh1.2.1.2136.1 Pichia stipitis e_gwh1.2.1.2136.1 N 0.750
LELG_00899 Lodderomyces elongisporus LELG_00899 N 0.750
CTRG_04103 Candida tropicalis CTRG_04103 N 0.750
Cd36_10710 Candida dubliniensis Cd36_10710 N 0.750
KRR1 Candida albicans orf19.661 N 0.750
estExt_fgenesh4_pg.C_90052 Volvox carteri estExt_fgenesh4_pg.C_90052 N 0.745
estExt_fgenesh2_kg.C_20554 Agaricus bisporus estExt_fgenesh2_kg.C_20554 N 0.740
eugene.0700010461 Ostreococcus lucimarinus eugene.0700010461 N 0.740
eu2.Lbscf0025g00750 Laccaria bicolor eu2.Lbscf0025g00750 N 0.740
estExt_Genewise1.C_20589 Coccomyxa C 169 estExt_Genewise1.C_20589 N 0.740
GJ19628 Drosophila virilis FBgn0206770 N 0.740
GL18627 Drosophila persimilis FBgn0156228 N 0.740
GA18062-RA Drosophila pseudoobscura FBgn0078070 N 0.740
dbe Drosophila melanogaster FBgn0020305 N 0.740
PGUG_03304 Candida guilliermondii PGUG_03304 N 0.740
GI18007 Drosophila mojavensis FBgn0140747 N 0.740
GG24622 Drosophila erecta FBgn0116754 N 0.740
CC1G_09940 Coprinopsis cinerea CC1G_09940 N 0.740
CNBG_5932 Cryptococcus neoformans CNBG_5932 N 0.740
PK22510.1 Cannabis sativa PK22510.1 N 0.740
RO3G_15602 Rhizopus oryzae RO3G_15602 N 0.740
estExt_Genewise1Plus.C_20668 Chlorella vulgaris estExt_Genewise1Plus.C_20668 N 0.740
GK24616 Drosophila willistoni FBgn0226576 N 0.740
GE15854 Drosophila yakuba FBgn0233416 N 0.740
CPAG_00706 Candida parapsilosis CPAG_00706 N 0.729
XP_002158002.1 Hydra magnipapillata XP_002158002.1 N 0.729
XP_001186312.1 Strongylocentrotus purpuratus XP_001186312.1 N 0.725
XP_786725.1 Strongylocentrotus purpuratus XP_786725.1 N 0.725
ZYRO0F18458g Zygosaccharomyces rouxii ZYRO0F18458g N 0.725
MDP0000130613 Malus x domestica MDP0000130613 N 0.720
MDP0000221204 Malus x domestica MDP0000221204 N 0.720
SAKL0C00484g Lachancea kluyveri SAKL0C00484g N 0.720
DEHA0E14685g Debaryomyces hansenii DEHA0E14685g N 0.720
PTSG_07198 Salpingoeca rosetta PTSG_07198 N 0.720
fgenesh2_kg.4_#_366_#_2882_1_CFPN Serpula lacrymans fgenesh2_kg.4_#_366_#_2882_1_CFPN N 0.720
Genemark.4150_g Heterobasidion annosum Genemark.4150_g N 0.720
fgenesh1_pm.C_scaffold_4000135 Pleurotus ostreatus fgenesh1_pm.C_scaffold_4000135 N 0.720
2380_YCL059C Saccharomyces bayanus 2380_YCL059C N 0.720
NCLIV_025560 Neospora caninum NCLIV_025560 N 0.720
KRR1 Saccharomyces cerevisiae YCL059C N 0.720
TGGT1_008040 Toxoplasma gondii TGGT1_008040 N 0.720
TGME49_062070 Toxoplasma gondii TGME49_062070 N 0.720
e_gw1.10.100.1 Phycomyces blakesleeanus e_gw1.10.100.1 N 0.720
e_gw1.1.3483.1 Schizophyllum commune e_gw1.1.3483.1 N 0.720
mis3 Schizosaccharomyces pombe SPBC25B2.05 N 0.720
estExt_fgenesh3_pm.C_180006 Postia placenta estExt_fgenesh3_pm.C_180006 N 0.720
Skud_Contig2065.14 Saccharomyces kudriavzevii Skud_Contig2065.14 N 0.720
2217_YCL059C Saccharomyces paradoxus 2217_YCL059C N 0.720
TGVEG_072780 Toxoplasma gondii TGVEG_072780 N 0.720
fgenesh_newKGs_kg.437__12__2686076:1 Emiliania huxleyi fgenesh_newKGs_kg.437__12__2686076:1 N 0.720
CLUG_04903 Candida lusitaniae CLUG_04903 N 0.720
2245_YCL059C Saccharomyces mikatae 2245_YCL059C N 0.720
gw1.1.562.1 Micromonas pusilla gw1.1.562.1 N 0.712
estExt_Genewise1Plus.C_20041 Sporobolomyces roseus estExt_Genewise1Plus.C_20041 N 0.702
Medtr5g094630 Medicago truncatula Medtr5g094630 N 0.700
Krr1 Mus musculus ENSMUSG00000063334 N 0.700
Hrb2 Rattus norvegicus ENSRNOG00000004035 N 0.700
KRR1 Loxodonta africana ENSLAFG00000015986 N 0.700
KRR1 Gasterosteus aculeatus ENSGACG00000019481 N 0.700
KRR1 Danio rerio ENSDARG00000011246 N 0.700
KRR1 Takifugu rubripes ENSTRUG00000004380 N 0.700
ATEG_01441 Aspergillus terreus CADATEAG00000360 N 0.700
Kwal_13011 Kluyveromyces waltii Kwal_13011 N 0.700
KLLA0C00506g Kluyveromyces lactis KLLA0C00506g N 0.700
fgenesh1_pm.00866_#_279 Aspergillus carbonarius fgenesh1_pm.00866_#_279 N 0.700
PredSwiss_ASS2010_156.1 Pneumocystis carinii PredSwiss_ASS2010_156.1 N 0.700
Pc15g00270 Penicillium chrysogenum Pc15g00270 N 0.700