TRV_06639 (Trichophyton verrucosum)
PUF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF)
PF00076 (RRM_1) 		IPR001313
IPR000504 		TRV_06639 T25329_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
TRV_06639 RRM 474 535
TRV_06639 PUF 680 714
TRV_06639 PUF 717 751
TRV_06639 PUF 753 786
TRV_06639 PUF 788 823
TRV_06639 PUF 827 860

Links

Other PUF,RRM family RBPs
Other Trichophyton verrucosum RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ARB_03872 Arthroderma benhamiae ARB_03872 N 0.996
fgenesh1_pm.00082_#_71 Aspergillus carbonarius fgenesh1_pm.00082_#_71 N 0.890
ACLA_089090 Aspergillus clavatus CADACLAG00008911 N 0.890
AFLA_129760 Aspergillus flavus CADAFLAG00010034 N 0.895
AFUA_2G05610 Aspergillus fumigatus CADAFUAG00003379 N 0.878
ANIA_07474 Aspergillus nidulans CADANIAG00000567 N 0.882
An02g13940 Aspergillus niger CADANGAG00002920 N 0.907
AO090001000672 Aspergillus oryzae CADAORAG00000614 N 0.895
ATEG_06748 Aspergillus terreus CADATEAG00008207 N 0.861
BDBG_08030 Blastomyces dermatitidis BDBG_08030 N 0.924
BC1G_15545 Botrytis cinerea BC1G_15545 N 0.755
CHGG_03262 Chaetomium globosum CHGG_03262 N 0.806
CIMG_00764 Coccidioides immitis CIMG_00764 N 0.928
CPSG_07974 Coccidioides posadasii CPSG_07974 N 0.928
estExt_Genewise1Plus.C_10494 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_10494 N 0.768
GLRG_00145 Colletotrichum graminicola GLRG_00145 N 0.789
e_gw1.1.1743.1 Cryphonectria parasitica e_gw1.1.1743.1 N 0.776
FGSG_13028 Fusarium graminearum FGSG_13028 N 0.776
FOXG_01859 Fusarium oxysporum FOXG_01859 N 0.776
FVEG_08236 Fusarium verticillioides FVEG_08236 N 0.781
HCAG_00994 Histoplasma capsulatum HCAG_00994 N 0.920
MGG_06318 Magnaporthe oryzae MGG_06318 N 0.798
MCYG_03539 Microsporum canis MCYG_03539 N 0.987
MGYG_03148 Microsporum gypseum MGYG_03148 N 0.996
estExt_Genewise1Plus.C_40921 Myceliophthora thermophila estExt_Genewise1Plus.C_40921 N 0.793
fgenesh1_pm.C_chr_3000287 Mycosphaerella graminicola fgenesh1_pm.C_chr_3000287 N 0.731
e_gw1.3.863.1 Nectria haematococca e_gw1.3.863.1 N 0.789
NFIA_082330 Neosartorya fischeri CADNFIAG00006734 N 0.886
NCU06199 Neurospora crassa NCU06199 N 0.806
estExt_fgenesh3_pm.C_50632 Neurospora discreta estExt_fgenesh3_pm.C_50632 N 0.802
estExt_fgenesh1_pm.C_60200 Neurospora tetrasperma estExt_fgenesh1_pm.C_60200 N 0.806
PABG_04750 Paracoccidioides brasiliensis PABG_04750 N 0.911
Pc22g08770 Penicillium chrysogenum Pc22g08770 N 0.886
PMAA_071510 Penicillium marneffei PMAA_071510 N 0.911
EAT78761.1 Phaeosphaeria nodorum EAT78761.1 N 0.761
Pa_7_8390 Podospora anserina Pa_7_8390 N 0.717
PTRG_10794 Pyrenophora tritici repentis PTRG_10794 N 0.759
SS1G_13666 Sclerotinia sclerotiorum SS1G_13666 N 0.764
SNOG_13737 Stagonospora nodorum SNOG_13737 N 0.761
estExt_Genewise1Plus.C_30707 Thielavia terrestris estExt_Genewise1Plus.C_30707 N 0.722
e_gw1.10.966.1 Trichoderma atroviride e_gw1.10.966.1 N 0.772
gw1.1.1237.1 Trichoderma reesei gw1.1.1237.1 N 0.793
gw1.2.1414.1 Trichoderma virens gw1.2.1414.1 N 0.764
TEQG_01260 Trichophyton equinum TEQG_01260 N 0.996
TERG_04970 Trichophyton rubrum TERG_04970 N 0.996
TESG_05413 Trichophyton tonsurans TESG_05413 N 0.992
GSTUMT00008056001 Tuber melanosporum GSTUMT00008056001 N 0.806
UREG_00739 Uncinocarpus reesii UREG_00739 N 0.907
VDBG_06774 Verticillium albo atrum VDBG_06774 N 0.772
VDAG_05840 Verticillium dahliae VDAG_05840 N 0.772