CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
SHARPIN
(
Anolis carolinensis
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSACAG00000007245
T26274_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000007131
RanBP ZF
185
211
GWPCPTCTFINKPTRPGCEMCSTDRPA
Links
Other
RanBP ZF
family RBPs
Other
Anolis carolinensis
RBPs
49 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
XM_002883237.1
Arabidopsis lyrata
fgenesh2_kg.3__2330__AT3G21100.2
N
0.000
XM_002891597.1
Arabidopsis lyrata
fgenesh2_kg.1__4219__AT1G51520.1
N
0.000
AT3G21100
Arabidopsis thaliana
AT3G21100-TAIR-G
N
0.000
AT3G63450
Arabidopsis thaliana
AT3G63450-TAIR-G
N
0.000
PK28383.1
Cannabis sativa
PK28383.1
N
0.000
Cucsa.333940
Cucumis sativus
Cucsa.333940
N
0.000
Cucsa.067590
Cucumis sativus
Cucsa.067590
N
0.000
MDP0000214823
Malus x domestica
MDP0000214823
N
0.000
cassava2293.valid.m1
Manihot esculenta
cassava2293.valid.m1
N
0.000
e_gw1.43.473.1
Selaginella moellendorfii
e_gw1.43.473.1
N
0.000
GSVIVG00030048001
Vitis vinifera
GSVIVG00030048001
N
0.000
GRMZM2G044004
Zea mays
GRMZM2G044004
N
0.000
GRMZM2G003424
Zea mays
GRMZM2G003424
N
0.000