125254 (Helobdella robusta)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 125254 T27260_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
ZRANB2
M259_0.6 		Homo sapiens Sequence logo not available AGGUAA(N)(1-2)AGGUAA SELEX
Cook et al.(2011)
1285_19304800 		0.705
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
125254 RanBP ZF 1 29
125254 RanBP ZF 55 84

Links

Other RanBP ZF family RBPs
Other Helobdella robusta RBPs

42 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s21g11t1 Acyrtosiphon pisum DGIL_AUG5s21g11t1 N 0.710
ZRANB2 Anolis carolinensis ENSACAG00000004293 I 0.721
A7YWH2_BOVIN Bos taurus ENSBTAG00000002627 I 0.705
LOC100411304 Callithrix jacchus ENSCJAG00000006356 I 0.705
ZRANB2 Canis familiaris ENSCAFG00000020412 I 0.705
estExt_Genewise1Plus.C_900027 Capitella teleta estExt_Genewise1Plus.C_900027 I 0.705
ZRANB2 Cavia porcellus ENSCPOG00000007829 I 0.705
ZRANB2 Choloepus hoffmanni ENSCHOG00000004408 I 0.705
zranb2 Danio rerio ENSDARG00000044332 I 0.721
Zranb2 Dipodomys ordii ENSDORG00000016348 I 0.705
ENSETEG00000014461 Echinops telfairi ENSETEG00000014461 I 0.705
LOC100053515 Equus caballus ENSECAG00000014173 I 0.705
ZRAB2_CHICK Gallus gallus ENSGALG00000011340 I 0.721
ZRANB2 Gasterosteus aculeatus ENSGACG00000009457 I 0.721
ZRANB2 Gorilla gorilla ENSGGOG00000023501 I 0.705
ZRANB2 Homo sapiens ENSG00000132485 D 0.705
XP_002165332.1 Hydra magnipapillata XP_002165332.1 N 0.705
ZRANB2 Loxodonta africana ENSLAFG00000017760 I 0.705
ENSMMUG00000017312 Macaca mulatta ENSMMUG00000017312 I 0.705
ZRANB2 Monodelphis domestica ENSMODG00000000504 I 0.705
Zranb2 Mus musculus ENSMUSG00000028180 I 0.705
ZRANB2 Myotis lucifugus ENSMLUG00000001762 I 0.705
e_gw.173.96.1 Nematostella vectensis e_gw.173.96.1 I 0.705
ZRANB2 Ochotona princeps ENSOPRG00000003839 I 0.705
ZRANB2 Oryctolagus cuniculus ENSOCUG00000004640 I 0.705
ZRANB2 Pan troglodytes ENSPTRG00000000856 I 0.705
PHUM217580 Pediculus humanus PHUM217580 N 0.721
ENSPPYG00000001240 Pongo pygmaeus ENSPPYG00000001240 I 0.705
ZRANB2 Procavia capensis ENSPCAG00000015159 I 0.705
Zranb2 Rattus norvegicus ENSRNOG00000009990 I 0.705
ZRANB2 Sorex araneus ENSSARG00000009452 I 0.705
ZRANB2 Spermophilus tridecemlineatus ENSSTOG00000000890 I 0.705
XP_001189132.1 Strongylocentrotus purpuratus XP_001189132.1 N 0.721
XP_785599.1 Strongylocentrotus purpuratus XP_785599.1 N 0.721
ZRANB2 Sus scrofa ENSSSCG00000003787 I 0.705
ZRANB2 Takifugu rubripes ENSTRUG00000003300 I 0.705
ZRANB2 Tetraodon nigroviridis ENSTNIG00000010498 I 0.705
ZRANB2 Tursiops truncatus ENSTTRG00000014680 I 0.705
AAI33785 Xenopus laevis AAI33785 I 0.721
AAH84309 Xenopus laevis AAH84309 I 0.721
CAA65321 Xenopus laevis CAA65321 I 0.721
zranb2 Xenopus tropicalis ENSXETG00000024108 I 0.721