fgenesh1_pg.C_scaffold_97000016 (Daphnia pulex)
RanBP ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP) IPR001876 fgenesh1_pg.C_scaffold_97000016 T27478_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_97000016 RanBP ZF 18 45

Links

Other RanBP ZF family RBPs
Other Daphnia pulex RBPs

104 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL008263 Aedes aegypti AAEL008263 N 0.821
Ame_R009996 Ailuropoda melanoleuca Ame_R009996 N 0.821
Ame_R002450 Ailuropoda melanoleuca Ame_R002450 N 0.786
RYBP Anolis carolinensis ENSACAG00000014789 N 0.786
YAF2 Anolis carolinensis ENSACAG00000003204 N 0.821
AGAP010288 Anopheles gambiae AGAP010288 N 0.893
amel4_ncbi_hmm6926 Apis mellifera amel4_ncbi_hmm6926 N 0.897
Q0VC56_BOVIN Bos taurus ENSBTAG00000015025 N 0.821
gw.67.121.1 Branchiostoma floridae gw.67.121.1 N 0.857
fgenesh2_pg.scaffold_670000003 Branchiostoma floridae fgenesh2_pg.scaffold_670000003 N 0.857
LOC100410479 Callithrix jacchus ENSCJAG00000017762 N 0.821
LOC100393237 Callithrix jacchus ENSCJAG00000015125 N 0.786
RYBP Canis familiaris ENSCAFG00000006441 N 0.786
e_gw1.39.163.1 Capitella teleta e_gw1.39.163.1 N 0.786
YAF2 Cavia porcellus ENSCPOG00000015156 N 0.821
YAF2 Choloepus hoffmanni ENSCHOG00000002266 N 0.821
RYBP Choloepus hoffmanni ENSCHOG00000011528 N 0.786
CpipJ_CPIJ008195 Culex pipiens CpipJ_CPIJ008195 N 0.821
CPIJ008195 Culex quinquefasciatus CPIJ008195 N 0.821
rybpa Danio rerio ENSDARG00000037773 N 0.714
rybpb Danio rerio ENSDARG00000053459 N 0.750
yaf2 Danio rerio ENSDARG00000015966 N 0.750
RYBP Dasypus novemcinctus ENSDNOG00000015175 N 0.786
GF11639 Drosophila ananassae FBgn0088679 N 0.893
GG22783 Drosophila erecta FBgn0114948 N 0.893
GH19772 Drosophila grimshawi FBgn0127236 N 0.893
RYBP Drosophila melanogaster FBgn0034763 N 0.893
GI20311 Drosophila mojavensis FBgn0143047 N 0.893
GL11369 Drosophila persimilis FBgn0148978 N 0.857
GA11466-RA Drosophila pseudoobscura FBgn0071517 N 0.857
GM15940 Drosophila sechellia FBgn0170856 N 0.893
GD11693 Drosophila simulans FBgn0183433 N 0.893
GJ22038 Drosophila virilis FBgn0209152 N 0.893
GK21447 Drosophila willistoni FBgn0223439 N 0.893
GE14012 Drosophila yakuba FBgn0231642 N 0.893
RYBP Echinops telfairi ENSETEG00000015145 N 0.750
YAF2 Echinops telfairi ENSETEG00000001634 N 0.786
LOC100062395 Equus caballus ENSECAG00000000266 N 0.786
ENSEEUG00000011620 Erinaceus europaeus ENSEEUG00000011620 N 0.786
YAF2 Erinaceus europaeus ENSEEUG00000004713 N 0.786
RYBP Gallus gallus ENSGALG00000007790 N 0.786
Q5ZKC5_CHICK Gallus gallus ENSGALG00000009540 N 0.821
RYBP Gasterosteus aculeatus ENSGACG00000011809 N 0.786
YAF2 Gasterosteus aculeatus ENSGACG00000004103 N 0.750
YAF2 Gorilla gorilla ENSGGOG00000007230 N 0.821
193935 Helobdella robusta 193935 N 0.750
YAF2 Homo sapiens ENSG00000015153 N 0.821
RYBP Homo sapiens ENSG00000163602 N 0.786
ISCW017896 Ixodes scapularis ISCW017896 N 0.828
RYBP Loxodonta africana ENSLAFG00000003133 N 0.750
YAF2 Loxodonta africana ENSLAFG00000014339 N 0.786
RYBP Macaca mulatta ENSMMUG00000007128 N 0.786
YAF2 Macaca mulatta ENSMMUG00000010868 N 0.821
YAF2 Macropus eugenii ENSMEUG00000012378 N 0.821
RYBP Microcebus murinus ENSMICG00000014365 N 0.786
YAF2 Monodelphis domestica ENSMODG00000008906 N 0.821
RYBP Monodelphis domestica ENSMODG00000003921 N 0.786
Yaf2 Mus musculus ENSMUSG00000022634 N 0.821
ENSMUSG00000055763 Mus musculus ENSMUSG00000055763 N 0.724
Rybp Mus musculus ENSMUSG00000072872 N 0.786
ENSMLUG00000015085 Myotis lucifugus ENSMLUG00000015085 N 0.750
nasonia_NCBI_hmm137104 Nasonia vitripennis nasonia_NCBI_hmm137104 N 0.862
estExt_fgenesh1_pg.C_1000062 Nematostella vectensis estExt_fgenesh1_pg.C_1000062 N 0.862
YAF2 Oryctolagus cuniculus ENSOCUG00000007321 N 0.786
RYBP Oryctolagus cuniculus ENSOCUG00000011730 N 0.786
YAF2 Oryzias latipes ENSORLG00000013064 N 0.786
RYBP Otolemur garnettii ENSOGAG00000007809 N 0.786
YAF2 Pan troglodytes ENSPTRG00000004837 N 0.821
RYBP Pan troglodytes ENSPTRG00000015105 N 0.786
PHUM359160 Pediculus humanus PHUM359160 N 0.793
ENSPPYG00000004421 Pongo pygmaeus ENSPPYG00000004421 N 0.821
ENSPPYG00000013718 Pongo pygmaeus ENSPPYG00000013718 N 0.786
RYBP Pteropus vampyrus ENSPVAG00000012905 N 0.786
YAF2 Pteropus vampyrus ENSPVAG00000016833 N 0.821
Rybp Rattus norvegicus ENSRNOG00000005353 N 0.786
Yaf2 Rattus norvegicus ENSRNOG00000004773 N 0.821
RYBP Sorex araneus ENSSARG00000011312 N 0.786
YAF2 Spermophilus tridecemlineatus ENSSTOG00000007224 N 0.786
XP_780545.1 Strongylocentrotus purpuratus XP_780545.1 N 0.821
XP_001186443.1 Strongylocentrotus purpuratus XP_001186443.1 N 0.828
XP_001183392.1 Strongylocentrotus purpuratus XP_001183392.1 N 0.821
XP_001183014.1 Strongylocentrotus purpuratus XP_001183014.1 N 0.828
YAF2 Taeniopygia guttata ENSTGUG00000005817 N 0.821
RYBP Taeniopygia guttata ENSTGUG00000009932 N 0.786
YAF2 Takifugu rubripes ENSTRUG00000016767 N 0.786
RYBP Takifugu rubripes ENSTRUG00000009347 N 0.821
YAF2 Takifugu rubripes ENSTRUG00000016786 N 0.750
YAF2 Tetraodon nigroviridis ENSTNIG00000018505 N 0.786
YAF2 Tetraodon nigroviridis ENSTNIG00000015988 N 0.750
RYBP Tetraodon nigroviridis ENSTNIG00000007355 N 0.821
amel4_ncbi_hmm6926 Tribolium castaneum amel4_ncbi_hmm6926 N 0.897
gw1.4.569.1 Trichoplax adhaerens gw1.4.569.1 N 0.724
RYBP Tupaia belangeri ENSTBEG00000003789 N 0.786
RYBP Tursiops truncatus ENSTTRG00000005375 N 0.786
YAF2 Tursiops truncatus ENSTTRG00000001376 N 0.821
YAF2 Vicugna pacos ENSVPAG00000012039 N 0.821
RYBP Vicugna pacos ENSVPAG00000007715 N 0.786
AAH73220 Xenopus laevis AAH73220 N 0.786
AAI06269 Xenopus laevis AAI06269 N 0.786
AAI55956 Xenopus laevis AAI55956 N 0.786
AAI69358 Xenopus laevis AAI69358 N 0.786
AAI69386 Xenopus laevis AAI69386 N 0.786
yaf2 Xenopus tropicalis ENSXETG00000006795 N 0.786
rybp Xenopus tropicalis ENSXETG00000015914 N 0.786