SOCG_02586 (Schizosaccharomyces octosporus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 SOCG_02586 T30688_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
SOCG_02586T0 RRM 247 317

Links

Other RRM family RBPs
Other Schizosaccharomyces octosporus RBPs

156 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s502g5t1 Acyrtosiphon pisum DGIL_AUG5s502g5t1 N 0.761
AAEL005690 Aedes aegypti AAEL005690 N 0.761
AAEL005541 Aedes aegypti AAEL005541 N 0.761
estExt_fgenesh2_kg.C_140159 Agaricus bisporus estExt_fgenesh2_kg.C_140159 N 0.789
Ame_R008665 Ailuropoda melanoleuca Ame_R008665 N 0.718
AB03196.1 Alternaria brassicicola AB03196.1 N 0.775
Aqu1.223583 Amphimedon queenslandica Aqu1.223583 N 0.718
PPIL4 Anolis carolinensis ENSACAG00000006936 N 0.718
AGAP008136 Anopheles gambiae AGAP008136 N 0.775
amel4_ncbi_hmm35613 Apis mellifera amel4_ncbi_hmm35613 N 0.746
amel4_ncbi_hmm11961 Apis mellifera amel4_ncbi_hmm11961 N 0.746
ARB_04672 Arthroderma benhamiae ARB_04672 N 0.761
fgenesh1_pm.00868_#_101 Aspergillus carbonarius fgenesh1_pm.00868_#_101 N 0.775
ACLA_065360 Aspergillus clavatus CADACLAG00006149 N 0.775
AFLA_071340 Aspergillus flavus CADAFLAG00008558 N 0.775
AFUA_7G02170 Aspergillus fumigatus CADAFUAG00001177 N 0.775
ANIA_09095 Aspergillus nidulans CADANIAG00009519 N 0.789
An12g00490 Aspergillus niger CADANGAG00009498 N 0.775
AO090038000594 Aspergillus oryzae CADAORAG00009343 N 0.775
ATEG_01850 Aspergillus terreus CADATEAG00001841 N 0.803
EDO07903.1 Babesia bovis EDO07903.1 N 0.718
estExt_Genewise1Plus.C_40228 Batrachochytrium dendrobatidis estExt_Genewise1Plus.C_40228 N 0.732
BDBG_04009 Blastomyces dermatitidis BDBG_04009 N 0.775
BGIBMGA008977 Bombyx mori BGIBMGA008977 N 0.789
A6QP53_BOVIN Bos taurus ENSBTAG00000016980 N 0.718
BC1G_10007 Botrytis cinerea BC1G_10007 N 0.775
estExt_fgenesh2_pm.C_1170007 Branchiostoma floridae estExt_fgenesh2_pm.C_1170007 N 0.718
CBN08292 Caenorhabditis brenneri CBN08292 N 0.775
CBG12494 Caenorhabditis briggsae CBG12494 N 0.761
sig-7 Caenorhabditis elegans F39H2.2 N 0.761
CJA06296 Caenorhabditis japonica CJA06296 N 0.761
CRE29496 Caenorhabditis remanei CRE29496 N 0.761
Q6JDI1_CANFA Canis familiaris ENSCAFG00000000379 N 0.718
PPIL4 Cavia porcellus ENSCPOG00000014614 N 0.718
CHGG_06839 Chaetomium globosum CHGG_06839 N 0.761
ENSCING00000006773 Ciona intestinalis ENSCING00000006773 I 0.732
ENSCSAVG00000010619 Ciona savignyi ENSCSAVG00000010619 N 0.718
CIMG_07762 Coccidioides immitis CIMG_07762 N 0.775
CPSG_09333 Coccidioides posadasii CPSG_09333 N 0.775
estExt_fgenesh1_kg.C_170006 Cochliobolus heterostrophus C5 estExt_fgenesh1_kg.C_170006 N 0.775
GLRG_06614 Colletotrichum graminicola GLRG_06614 N 0.746
estExt_Genewise1Plus.C_61472 Cryphonectria parasitica estExt_Genewise1Plus.C_61472 N 0.789
CNBG_1409 Cryptococcus neoformans CNBG_1409 N 0.761
Chro.80276 Cryptosporidium hominis Chro.80276 N 0.718
cgd8_2350 Cryptosporidium parvum cgd8_2350 N 0.718
CpipJ_CPIJ000912 Culex pipiens CpipJ_CPIJ000912 N 0.761
CPIJ000912 Culex quinquefasciatus CPIJ000912 N 0.761
ppil4 Danio rerio ENSDARG00000043854 N 0.732
GF18772 Drosophila ananassae FBgn0095789 N 0.718
GG12319 Drosophila erecta FBgn0104609 N 0.704
GH18460 Drosophila grimshawi FBgn0125927 N 0.718
CG5808 Drosophila melanogaster FBgn0027617 N 0.704
GI24038 Drosophila mojavensis FBgn0146761 N 0.718
GL13859 Drosophila persimilis FBgn0151464 N 0.718
GA26948-RA Drosophila pseudoobscura FBgn0248319 N 0.718
GM23461 Drosophila sechellia FBgn0178328 N 0.704
GD18267 Drosophila simulans FBgn0189800 N 0.704
GJ23668 Drosophila virilis FBgn0210765 N 0.718
GK13166 Drosophila willistoni FBgn0215175 N 0.704
GE10772 Drosophila yakuba FBgn0228614 N 0.704
PPIL4 Equus caballus ENSECAG00000021819 N 0.718
PPIL4 Erinaceus europaeus ENSEEUG00000000959 N 0.704
FGSG_04479 Fusarium graminearum FGSG_04479 N 0.761
FOXG_13736 Fusarium oxysporum FOXG_13736 N 0.775
FVEG_11166 Fusarium verticillioides FVEG_11166 N 0.775
PPIL4 Gallus gallus ENSGALG00000012364 N 0.732
PPIL4 Gasterosteus aculeatus ENSGACG00000006639 N 0.746
PPIL4 Gorilla gorilla ENSGGOG00000009686 N 0.718
83285 Helobdella robusta 83285 N 0.718
fgenesh3_kg.4__300__1748_1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.4__300__1748_1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.761
HCAG_04417 Histoplasma capsulatum HCAG_04417 N 0.775
PPIL4 Homo sapiens ENSG00000131013 N 0.718
e_gww1.4.788.1 Laccaria bicolor e_gww1.4.788.1 N 0.761
LOAG_08216 Loa loa LOAG_08216 N 0.761
gw1.13.70.1 Lottia gigantea gw1.13.70.1 N 0.761
PPIL4 Loxodonta africana ENSLAFG00000026804 N 0.718
PPIL4 Macaca mulatta ENSMMUG00000023067 N 0.718
MGG_10681 Magnaporthe oryzae MGG_10681 N 0.789
PPIL4 Meleagris gallopavo ENSMGAG00000012596 N 0.732
PPIL4 Microcebus murinus ENSMICG00000006287 N 0.718
MCYG_06073 Microsporum canis MCYG_06073 N 0.775
MGYG_05886 Microsporum gypseum MGYG_05886 N 0.775
PPIL4 Monodelphis domestica ENSMODG00000016825 N 0.718
e_gw1.6.80.1 Monosiga brevicollis e_gw1.6.80.1 N 0.732
estExt_Genewise1Plus.C_40585 Mucor circinelloides estExt_Genewise1Plus.C_40585 N 0.746
Ppil4 Mus musculus ENSMUSG00000015757 N 0.718
estExt_Genewise1.C_30053 Myceliophthora thermophila estExt_Genewise1.C_30053 N 0.732
fgenesh1_pm.C_scaffold_9000117 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_9000117 N 0.817
estExt_Genewise1Plus.C_chr_40303 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_40303 N 0.803
PPIL4 Myotis lucifugus ENSMLUG00000002766 N 0.718
nasonia_NCBI_hmm783174 Nasonia vitripennis nasonia_NCBI_hmm783174 N 0.761
fgenesh1_pm.sca_11_chr8_3_0000173 Nectria haematococca fgenesh1_pm.sca_11_chr8_3_0000173 N 0.761
e_gw.42.57.1 Nematostella vectensis e_gw.42.57.1 N 0.732
NFIA_114890 Neosartorya fischeri CADNFIAG00010434 N 0.775
NCU10166 Neurospora crassa NCU10166 N 0.761
estExt_Genewise1Plus.C_12820 Neurospora discreta estExt_Genewise1Plus.C_12820 N 0.761
gw1.1.256.1 Neurospora tetrasperma gw1.1.256.1 N 0.761
PPIL4 Ochotona princeps ENSOPRG00000005619 N 0.718
SNAPOd2T00004354001 Oikopleura dioica SNAPOd2T00004354001 N 0.718
ENSOANG00000001063 Ornithorhynchus anatinus ENSOANG00000001063 N 0.732
PPIL4 Oryctolagus cuniculus ENSOCUG00000007696 N 0.718
PPIL4 Oryzias latipes ENSORLG00000015310 N 0.732
gwEuk.12.143.1 Ostreococcus lucimarinus gwEuk.12.143.1 N 0.704
PPIL4 Otolemur garnettii ENSOGAG00000014153 N 0.718
PPIL4 Pan troglodytes ENSPTRG00000018692 N 0.718
PABG_01156 Paracoccidioides brasiliensis PABG_01156 N 0.775
PHUM268300 Pediculus humanus PHUM268300 N 0.732
Pc21g11960 Penicillium chrysogenum Pc21g11960 N 0.761
PMAA_010740 Penicillium marneffei PMAA_010740 N 0.761
EAT81165.2 Phaeosphaeria nodorum EAT81165.2 N 0.775
e_gww2.22.65.1 Phanerochaete chrysosporium e_gww2.22.65.1 N 0.775
e_gw1.20.215.1 Phycomyces blakesleeanus e_gw1.20.215.1 N 0.775
e_gw1.4.2113.1 Pleurotus ostreatus e_gw1.4.2113.1 N 0.789
PredSwiss_CON599.3 Pneumocystis carinii PredSwiss_CON599.3 N 0.746
PredSwiss_ASS2010_933.2 Pneumocystis carinii PredSwiss_ASS2010_933.2 N 0.746
Pa_2_13850 Podospora anserina Pa_2_13850 N 0.761
estExt_fgenesh3_pg.C_910016 Postia placenta estExt_fgenesh3_pg.C_910016 N 0.775
PPIL4 Procavia capensis ENSPCAG00000008203 N 0.718
PPIL4 Pteropus vampyrus ENSPVAG00000000746 N 0.718
PTRG_04608 Pyrenophora tritici repentis PTRG_04608 N 0.775
Ppil4 Rattus norvegicus ENSRNOG00000015552 N 0.718
RO3G_06974 Rhizopus oryzae RO3G_06974 N 0.746
PTSG_07932 Salpingoeca rosetta PTSG_07932 N 0.761
fgenesh1_pm.C_scaffold_1000049 Schizophyllum commune fgenesh1_pm.C_scaffold_1000049 N 0.775
SPOG_01415 Schizosaccharomyces cryophilus SPOG_01415 N 0.972
SJAG_00470 Schizosaccharomyces japonicus SJAG_00470 N 0.873
cyp6 Schizosaccharomyces pombe SPBC17G9.05 N 0.915
fgenesh2_pm.4_#_1016 Serpula lacrymans fgenesh2_pm.4_#_1016 N 0.761
PPIL4 Sorex araneus ENSSARG00000011244 N 0.718
SPPG_03169 Spizellomyces punctatus SPPG_03169 N 0.775
e_gw1.4.370.1 Sporobolomyces roseus e_gw1.4.370.1 N 0.718
SNOG_11457 Stagonospora nodorum SNOG_11457 N 0.775
PPIL4 Taeniopygia guttata ENSTGUG00000010655 N 0.718
PPIL4 Takifugu rubripes ENSTRUG00000006670 N 0.732
PPIL4 Tetraodon nigroviridis ENSTNIG00000002706 N 0.746
estExt_Genewise1.C_23809 Thielavia terrestris estExt_Genewise1.C_23809 N 0.718
TGVEG_068650 Toxoplasma gondii TGVEG_068650 N 0.704
TGGT1_083150 Toxoplasma gondii TGGT1_083150 N 0.704
TGME49_027850 Toxoplasma gondii TGME49_027850 N 0.704
estExt_Genewise1Plus.C_11662 Tremella mesenterica estExt_Genewise1Plus.C_11662 N 0.789
e_gw1.11.236.1 Trichoderma atroviride e_gw1.11.236.1 N 0.761
estExt_GeneWisePlus.C_270056 Trichoderma reesei estExt_GeneWisePlus.C_270056 N 0.761
fgenesh1_pm.C_scaffold_3000471 Trichoderma virens fgenesh1_pm.C_scaffold_3000471 N 0.761
TEQG_07016 Trichophyton equinum TEQG_07016 N 0.761
TERG_06028 Trichophyton rubrum TERG_06028 N 0.761
TRV_03115 Trichophyton verrucosum TRV_03115 N 0.761
fgeneshTA2_pg.C_scaffold_8000290 Trichoplax adhaerens fgeneshTA2_pg.C_scaffold_8000290 N 0.718
GSTUMT00009813001 Tuber melanosporum GSTUMT00009813001 N 0.746
PPIL4 Tursiops truncatus ENSTTRG00000006014 N 0.718
UREG_02113 Uncinocarpus reesii UREG_02113 N 0.775
UM03490 Ustilago maydis UM03490 N 0.789
VDBG_02138 Verticillium albo atrum VDBG_02138 N 0.761
VDAG_02606 Verticillium dahliae VDAG_02606 N 0.775
PPIL4 Vicugna pacos ENSVPAG00000005157 N 0.718
WUBG_04730 Wuchereria bancrofti WUBG_04730 N 0.732
ppil4 Xenopus tropicalis ENSXETG00000021385 N 0.746