CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TESG_08570
(
Trichophyton tonsurans
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
TESG_08570
T31196_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TESG_08570T0
RRM
123
202
VYVIGLNPTIRDENLLLQTLRGDQYFGQYGDIDKIVVSKAKPGGNPNQGIGVYVTFARKIDAATCIAAVDGSPNGDRVLR
Links
Other
RRM
family RBPs
Other
Trichophyton tonsurans
RBPs
20 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ARB_01970
Arthroderma benhamiae
ARB_01970
N
1.000
ACLA_083590
Aspergillus clavatus
CADACLAG00008130
N
0.727
AFUA_6G08820
Aspergillus fumigatus
CADAFUAG00001582
N
0.716
ANIA_10228
Aspergillus nidulans
CADANIAG00008371
N
0.705
An11g06210
Aspergillus niger
CADANGAG00008954
N
0.727
ATEG_06631
Aspergillus terreus
CADATEAG00009109
N
0.716
BDBG_02075
Blastomyces dermatitidis
BDBG_02075
N
0.761
CIMG_01358
Coccidioides immitis
CIMG_01358
N
0.750
CPSG_01825
Coccidioides posadasii
CPSG_01825
N
0.708
HCAG_05763
Histoplasma capsulatum
HCAG_05763
N
0.761
MCYG_00552
Microsporum canis
MCYG_00552
N
1.000
MGYG_01410
Microsporum gypseum
MGYG_01410
N
1.000
NFIA_054470
Neosartorya fischeri
CADNFIAG00005274
N
0.716
PABG_01879
Paracoccidioides brasiliensis
PABG_01879
N
0.730
Pc12g08810
Penicillium chrysogenum
Pc12g08810
N
0.716
PMAA_064610
Penicillium marneffei
PMAA_064610
N
0.705
TEQG_06760
Trichophyton equinum
TEQG_06760
N
1.000
TERG_00095
Trichophyton rubrum
TERG_00095
N
1.000
TRV_07199
Trichophyton verrucosum
TRV_07199
N
0.753
UREG_01281
Uncinocarpus reesii
UREG_01281
N
0.719