An11g06210 (Aspergillus niger)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADANGAG00008954 T33564_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00008787 RRM 123 202

Links

Other RRM family RBPs
Other Aspergillus niger RBPs

24 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.00118_#_293 Aspergillus carbonarius fgenesh1_pg.00118_#_293 N 0.951
ACLA_083590 Aspergillus clavatus CADACLAG00008130 N 0.950
ATEG_06631 Aspergillus terreus CADATEAG00009109 N 0.938
HCAG_05763 Histoplasma capsulatum HCAG_05763 N 0.925
AFUA_6G08820 Aspergillus fumigatus CADAFUAG00001582 N 0.925
BDBG_02075 Blastomyces dermatitidis BDBG_02075 N 0.925
NFIA_054470 Neosartorya fischeri CADNFIAG00005274 N 0.925
CIMG_01358 Coccidioides immitis CIMG_01358 N 0.900
ANIA_10228 Aspergillus nidulans CADANIAG00008371 N 0.900
Pc12g08810 Penicillium chrysogenum Pc12g08810 N 0.900
PABG_01879 Paracoccidioides brasiliensis PABG_01879 N 0.889
UREG_01281 Uncinocarpus reesii UREG_01281 N 0.877
AO090001000554 Aspergillus oryzae CADAORAG00000508 N 0.864
AFLA_128590 Aspergillus flavus CADAFLAG00009917 N 0.864
PMAA_064610 Penicillium marneffei PMAA_064610 N 0.863
TRV_07199 Trichophyton verrucosum TRV_07199 N 0.852
CPSG_01825 Coccidioides posadasii CPSG_01825 N 0.852
MCYG_00552 Microsporum canis MCYG_00552 N 0.727
ARB_01970 Arthroderma benhamiae ARB_01970 N 0.727
TERG_00095 Trichophyton rubrum TERG_00095 N 0.727
MGYG_01410 Microsporum gypseum MGYG_01410 N 0.727
TEQG_06760 Trichophyton equinum TEQG_06760 N 0.727
TESG_08570 Trichophyton tonsurans TESG_08570 N 0.727
e_gw1.11.630.1 Cochliobolus heterostrophus C5 e_gw1.11.630.1 N 0.700