BRADI2G56120 (Brachypodium distachyon)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BRADI2G56120 T33202_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BRADI2G56120.2 RRM 8 67
BRADI2G56120.2 RRM 106 171
BRADI2G56120.2 RRM 258 324
BRADI2G56120.2 RRM 368 434

Links

Other RRM family RBPs
Other Brachypodium distachyon RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BRADI2G24150 Brachypodium distachyon BRADI2G24150 N 0.781
PK14373.1 Cannabis sativa PK14373.1 N 0.738
Cucsa.365870 Cucumis sativus Cucsa.365870 N 0.712
Glyma20g30820.1 Glycine max Glyma20g30820.1 N 0.716
Glyma10g36770.1 Glycine max Glyma10g36770.1 N 0.705
Glyma02g08870.1 Glycine max Glyma02g08870.1 N 0.716
chr5.CM0052.230.nd Lotus japonicus chr5.CM0052.230.nd N 0.710
cassava19040.valid.m1 Manihot esculenta cassava19040.valid.m1 N 0.712
cassava19039.valid.m1 Manihot esculenta cassava19039.valid.m1 N 0.712
cassava19038.valid.m1 Manihot esculenta cassava19038.valid.m1 N 0.712
cassava19037.valid.m1 Manihot esculenta cassava19037.valid.m1 N 0.712
cassava12743.valid.m1 Manihot esculenta cassava12743.valid.m1 N 0.712
Medtr1g124970 Medicago truncatula Medtr1g124970 N 0.716
mgf010164m Mimulus guttatus mgf010164m N 0.717
LOC_Os05g36120 Oryza sativa LOC_Os05g36120 N 0.788
LOC_Os01g64770 Oryza sativa LOC_Os01g64770 N 0.821
PDK_20s1358001g002 Phoenix dactylifera PDK_20s1358001g002 N 0.746
B9H7U5_POPTR Populus trichocarpa POPTR_0005s21660 N 0.703
ppa005775m Prunus persica ppa005775m N 0.731
SB09G021560 Sorghum bicolor Sb09g021560 N 0.792
GSVIVG00034558001 Vitis vinifera GSVIVG00034558001 N 0.722
GRMZM2G052926 Zea mays GRMZM2G052926 N 0.785
GRMZM2G070113 Zea mays GRMZM2G070113 N 0.781