SLTM (Choloepus hoffmanni)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCHOG00000001125 T35237_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCHOP00000001000 RRM 245 312

Links

Other RRM family RBPs
Other Choloepus hoffmanni RBPs

112 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R016388 Ailuropoda melanoleuca Ame_R016388 N 0.718
Ame_R016389 Ailuropoda melanoleuca Ame_R016389 N 0.714
Ame_R015170 Ailuropoda melanoleuca Ame_R015170 N 0.958
SLTM Anolis carolinensis ENSACAG00000015120 N 0.915
ENSACAG00000016928 Anolis carolinensis ENSACAG00000016928 N 0.700
ENSACAG00000016893 Anolis carolinensis ENSACAG00000016893 N 0.761
ENSBTAG00000007875 Bos taurus ENSBTAG00000007875 N 0.714
SLTM Bos taurus ENSBTAG00000011319 N 0.958
LOC787645 Bos taurus ENSBTAG00000035584 N 0.729
A7E314_BOVIN Bos taurus ENSBTAG00000035585 N 0.714
SAFB2 Bos taurus ENSBTAG00000001790 N 0.732
estExt_fgenesh2_pg.C_4200008 Branchiostoma floridae estExt_fgenesh2_pg.C_4200008 N 0.732
estExt_fgenesh2_pg.C_3630023 Branchiostoma floridae estExt_fgenesh2_pg.C_3630023 N 0.732
SAFB2 Callithrix jacchus ENSCJAG00000017205 N 0.732
SAFB Callithrix jacchus ENSCJAG00000017081 N 0.714
SLTM Callithrix jacchus ENSCJAG00000020395 N 0.944
SAFB2 Canis familiaris ENSCAFG00000018814 N 0.732
SAFB Canis familiaris ENSCAFG00000018803 N 0.714
SLTM Canis familiaris ENSCAFG00000016586 N 0.958
SAFB2 Cavia porcellus ENSCPOG00000011394 N 0.704
SLTM Cavia porcellus ENSCPOG00000026109 N 0.944
SAFB Cavia porcellus ENSCPOG00000026322 N 0.714
safb Danio rerio ENSDARG00000020467 N 0.718
ENSDARG00000017150 Danio rerio ENSDARG00000017150 N 0.859
SLTM Dasypus novemcinctus ENSDNOG00000002975 N 0.958
SAFB Dasypus novemcinctus ENSDNOG00000015746 N 0.714
Safb2 Dipodomys ordii ENSDORG00000016199 N 0.732
Sltm Dipodomys ordii ENSDORG00000007463 N 0.958
Safb Dipodomys ordii ENSDORG00000016200 N 0.714
SAFB2 Echinops telfairi ENSETEG00000016756 N 0.732
SAFB Echinops telfairi ENSETEG00000018679 N 0.714
SLTM Echinops telfairi ENSETEG00000008003 N 0.944
LOC100064922 Equus caballus ENSECAG00000018978 N 0.732
LOC100064953 Equus caballus ENSECAG00000018659 N 0.714
LOC100068259 Equus caballus ENSECAG00000011267 N 0.958
SLTM Erinaceus europaeus ENSEEUG00000000580 N 0.887
SLTM Felis catus ENSFCAG00000004826 N 0.944
SAFB Felis catus ENSFCAG00000011835 N 0.714
SAFB2 Felis catus ENSFCAG00000011834 N 0.732
SAFB2 Gallus gallus ENSGALG00000013365 N 0.700
SLTM Gallus gallus ENSGALG00000004192 N 0.915
SAFB2 Gallus gallus ENSGALG00000001948 N 0.732
SLTM Gasterosteus aculeatus ENSGACG00000015814 N 0.817
SAFB Gasterosteus aculeatus ENSGACG00000011385 N 0.704
SAFB Gorilla gorilla ENSGGOG00000015109 N 0.714
SAFB2 Gorilla gorilla ENSGGOG00000015093 N 0.732
SAFB2 Homo sapiens ENSG00000130254 N 0.732
SAFB Homo sapiens ENSG00000160633 N 0.714
SLTM Homo sapiens ENSG00000137776 N 0.958
SLTM Loxodonta africana ENSLAFG00000017922 N 0.944
SAFB Loxodonta africana ENSLAFG00000003840 N 0.714
SAFB2 Loxodonta africana ENSLAFG00000003836 N 0.732
SLTM Macaca mulatta ENSMMUG00000022200 N 0.958
SAFB Macaca mulatta ENSMMUG00000017970 N 0.714
SAFB2 Macaca mulatta ENSMMUG00000017968 N 0.732
SAFB2 Macropus eugenii ENSMEUG00000002456 N 0.743
SLTM Meleagris gallopavo ENSMGAG00000005313 N 0.915
ENSMGAG00000001051 Meleagris gallopavo ENSMGAG00000001051 N 0.732
ENSMGAG00000001101 Meleagris gallopavo ENSMGAG00000001101 N 0.700
SAFB Microcebus murinus ENSMICG00000008739 N 0.714
SLTM Microcebus murinus ENSMICG00000013069 N 0.944
XM_001377567.1 Monodelphis domestica ENSMODG00000008794 N 0.930
ENSMODG00000001236 Monodelphis domestica ENSMODG00000001236 N 0.729
SAFB2 Monodelphis domestica ENSMODG00000001178 N 0.732
Safb2 Mus musculus ENSMUSG00000042625 N 0.718
Sltm Mus musculus ENSMUSG00000032212 N 0.944
Safb Mus musculus ENSMUSG00000071054 N 0.700
SAFB2 Myotis lucifugus ENSMLUG00000001050 N 0.732
SAFB Myotis lucifugus ENSMLUG00000001081 N 0.714
SAFB Ochotona princeps ENSOPRG00000011561 N 0.700
ENSOANG00000013644 Ornithorhynchus anatinus ENSOANG00000013644 N 0.732
SLTM Ornithorhynchus anatinus ENSOANG00000012311 N 0.930
SAFB2 Oryctolagus cuniculus ENSOCUG00000001592 N 0.704
SLTM Oryctolagus cuniculus ENSOCUG00000003327 N 0.958
SAFB Oryctolagus cuniculus ENSOCUG00000014628 N 0.714
SLTM Oryzias latipes ENSORLG00000008161 N 0.845
SAFB Oryzias latipes ENSORLG00000016989 N 0.704
SLTM Otolemur garnettii ENSOGAG00000011297 N 0.944
SAFB2 Otolemur garnettii ENSOGAG00000006855 N 0.732
SAFB Pan troglodytes ENSPTRG00000010335 N 0.700
SAFB2 Pan troglodytes ENSPTRG00000010334 N 0.732
SLTM Pan troglodytes ENSPTRG00000007121 N 0.958
ENSPPYG00000009428 Pongo pygmaeus ENSPPYG00000009428 N 0.714
ENSPPYG00000006515 Pongo pygmaeus ENSPPYG00000006515 N 0.958
ENSPPYG00000009427 Pongo pygmaeus ENSPPYG00000009427 N 0.732
SAFB2 Procavia capensis ENSPCAG00000006352 N 0.732
SAFB Pteropus vampyrus ENSPVAG00000004913 N 0.714
SLTM Pteropus vampyrus ENSPVAG00000015056 N 0.958
Sltm Rattus norvegicus ENSRNOG00000013708 N 0.958
SAFB Sorex araneus ENSSARG00000010475 N 0.714
SAFB2 Sorex araneus ENSSARG00000000649 N 0.732
SAFB2 Spermophilus tridecemlineatus ENSSTOG00000002758 N 0.732
ENSSSCG00000013523 Sus scrofa ENSSSCG00000013523 N 0.732
ENSSSCG00000004591 Sus scrofa ENSSSCG00000004591 N 0.944
ENSSSCG00000004592 Sus scrofa ENSSSCG00000004592 N 0.944
SLTM Taeniopygia guttata ENSTGUG00000006017 N 0.915
SAFB-2 Taeniopygia guttata ENSTGUG00000000502 N 0.700
SAFB-1 Taeniopygia guttata ENSTGUG00000000489 N 0.732
SLTM Takifugu rubripes ENSTRUG00000017767 N 0.803
SAFB Takifugu rubripes ENSTRUG00000003567 N 0.704
SAFB Tarsius syrichta ENSTSYG00000001851 N 0.714
ENSTNIG00000015470 Tetraodon nigroviridis ENSTNIG00000015470 N 0.704
SLTM Tetraodon nigroviridis ENSTNIG00000009334 N 0.789
SLTM Tupaia belangeri ENSTBEG00000000945 N 0.958
SAFB Tursiops truncatus ENSTTRG00000013588 N 0.714
SAFB2 Tursiops truncatus ENSTTRG00000013585 N 0.732
SLTM Tursiops truncatus ENSTTRG00000005246 N 0.958
SAFB Vicugna pacos ENSVPAG00000012043 N 0.714
SLTM Vicugna pacos ENSVPAG00000008606 N 0.958
Q498L2 Xenopus laevis Q498L2 N 0.887
AAI00172 Xenopus laevis AAI00172 N 0.887
sltm Xenopus tropicalis ENSXETG00000010840 N 0.887