ENSDARG00000011704 (Danio rerio)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDARG00000011704 T36066_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
G3BP2
M021_0.6 		Homo sapiens AGGAUDR RNAcompete
Ray et al.(2013)
RNCMPT00021 		0.910
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000004033 RRM 366 432
ENSDARP00000027568 RRM 365 431

Links

Other RRM family RBPs
Other Danio rerio RBPs

82 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R007258 Ailuropoda melanoleuca Ame_R007258 I 0.910
Ame_R008928 Ailuropoda melanoleuca Ame_R008928 I 0.701
G3BP2 Anolis carolinensis ENSACAG00000008695 I 0.896
G3BP1 Anolis carolinensis ENSACAG00000009792 I 0.000
Q2KJ17_BOVIN Bos taurus ENSBTAG00000014041 I 0.910
G3BP1_BOVIN Bos taurus ENSBTAG00000020309 I 0.701
e_gw.517.12.1 Branchiostoma floridae e_gw.517.12.1 I 0.700
e_gw.9.159.1 Branchiostoma floridae e_gw.9.159.1 I 0.700
LOC100413275 Callithrix jacchus ENSCJAG00000019897 I 0.910
G3BP1 Callithrix jacchus ENSCJAG00000015407 I 0.701
G3BP1 Canis familiaris ENSCAFG00000017841 I 0.701
G3BP2 Canis familiaris ENSCAFG00000008371 I 0.910
ENSCPOG00000006626 Cavia porcellus ENSCPOG00000006626 I 0.000
G3BP2 Cavia porcellus ENSCPOG00000012052 I 0.910
ENSCHOG00000010802 Choloepus hoffmanni ENSCHOG00000010802 I 0.701
G3BP2 Choloepus hoffmanni ENSCHOG00000005346 I 0.881
G3BP2 Danio rerio ENSDARG00000074572 I 1.000
g3bp1 Danio rerio ENSDARG00000017741 I 0.000
g3bp2 Danio rerio ENSDARG00000014790 I 0.896
G3BP2 Dasypus novemcinctus ENSDNOG00000012491 I 0.881
G3BP1 Dasypus novemcinctus ENSDNOG00000018758 I 0.701
G3bp2 Dipodomys ordii ENSDORG00000004825 I 0.910
G3BP1 Echinops telfairi ENSETEG00000017447 I 0.701
G3BP2 Echinops telfairi ENSETEG00000016219 I 0.866
LOC100060090 Equus caballus ENSECAG00000003368 I 0.701
G3BP2 Equus caballus ENSECAG00000007917 I 0.910
G3BP1 Erinaceus europaeus ENSEEUG00000012278 I 0.701
G3BP2 Erinaceus europaeus ENSEEUG00000013436 I 0.910
G3BP2 Felis catus ENSFCAG00000010124 I 0.910
G3BP2 Gallus gallus ENSGALG00000010882 I 0.910
G3BP1 Gasterosteus aculeatus ENSGACG00000016848 I 0.000
G3BP2 Gasterosteus aculeatus ENSGACG00000017342 I 0.940
G3BP2 Gorilla gorilla ENSGGOG00000014947 I 0.910
G3BP1 Homo sapiens ENSG00000145907 D 0.701
G3BP2 Homo sapiens ENSG00000138757 D 0.910
G3BP1 Loxodonta africana ENSLAFG00000009182 I 0.701
G3BP2 Loxodonta africana ENSLAFG00000023321 I 0.910
G3BP1 Macaca mulatta ENSMMUG00000014701 I 0.701
G3BP2 Macaca mulatta ENSMMUG00000002153 I 0.910
G3BP2 Macropus eugenii ENSMEUG00000004126 I 0.910
G3BP1 Meleagris gallopavo ENSMGAG00000005963 I 0.731
G3BP2 Meleagris gallopavo ENSMGAG00000007221 I 0.910
G3BP1 Microcebus murinus ENSMICG00000012235 I 0.701
G3BP2 Microcebus murinus ENSMICG00000007795 I 0.910
XM_001369493.1 Monodelphis domestica ENSMODG00000008993 I 0.000
G3BP2 Monodelphis domestica ENSMODG00000019205 I 0.910
G3bp2 Mus musculus ENSMUSG00000029405 I 0.910
G3bp1 Mus musculus ENSMUSG00000018583 I 0.701
G3BP2 Myotis lucifugus ENSMLUG00000004753 I 0.910
G3BP1 Myotis lucifugus ENSMLUG00000001581 I 0.701
G3BP1 Ochotona princeps ENSOPRG00000010562 I 0.731
G3BP2 Ochotona princeps ENSOPRG00000006307 I 0.910
ENSOANG00000004714 Ornithorhynchus anatinus ENSOANG00000004714 I 0.910
G3BP1 Ornithorhynchus anatinus ENSOANG00000005110 I 0.731
G3BP2 Oryctolagus cuniculus ENSOCUG00000003262 I 0.910
ENSOCUG00000022143 Oryctolagus cuniculus ENSOCUG00000022143 I 0.701
ENSOCUG00000022069 Oryctolagus cuniculus ENSOCUG00000022069 I 0.701
G3BP2 Oryzias latipes ENSORLG00000007012 I 0.896
G3BP1 Oryzias latipes ENSORLG00000011422 I 0.000
G3BP2 Otolemur garnettii ENSOGAG00000000157 I 0.910
G3BP2 Pan troglodytes ENSPTRG00000016175 I 0.910
G3BP1 Pan troglodytes ENSPTRG00000017438 I 0.701
ENSPPYG00000015968 Pongo pygmaeus ENSPPYG00000015968 I 0.701
ENSPPYG00000014846 Pongo pygmaeus ENSPPYG00000014846 I 0.910
G3BP2 Procavia capensis ENSPCAG00000015109 I 0.910
G3BP2 Pteropus vampyrus ENSPVAG00000010166 I 0.910
G3BP1 Pteropus vampyrus ENSPVAG00000017250 I 0.701
ENSRNOG00000001595 Rattus norvegicus ENSRNOG00000001595 I 0.761
G3bp2 Rattus norvegicus ENSRNOG00000002433 I 0.910
G3bp1 Rattus norvegicus ENSRNOG00000013186 I 0.000
G3BP2 Sorex araneus ENSSARG00000009503 I 0.910
ENSSSCG00000017079 Sus scrofa ENSSSCG00000017079 I 0.701
ENSSSCG00000017080 Sus scrofa ENSSSCG00000017080 I 0.701
G3BP1 Taeniopygia guttata ENSTGUG00000000753 I 0.731
G3BP2 Taeniopygia guttata ENSTGUG00000001561 I 0.910
G3BP2 Takifugu rubripes ENSTRUG00000011405 I 0.896
G3BP2 Tarsius syrichta ENSTSYG00000011860 N 0.000
G3BP1 Tarsius syrichta ENSTSYG00000004570 I 0.701
G3BP1 Tetraodon nigroviridis ENSTNIG00000012954 I 0.000
G3BP2 Tetraodon nigroviridis ENSTNIG00000011044 I 0.896
G3BP1 Tupaia belangeri ENSTBEG00000004386 I 0.701
ENSTBEG00000012323 Tupaia belangeri ENSTBEG00000012323 I 0.910
ENSTBEG00000008258 Tupaia belangeri ENSTBEG00000008258 I 0.896
G3BP2 Tursiops truncatus ENSTTRG00000013795 I 0.896
G3BP2 Vicugna pacos ENSVPAG00000010710 I 0.910
G3BP1 Vicugna pacos ENSVPAG00000004461 I 0.701
AAH76729 Xenopus laevis AAH76729 I 0.791
g3bp2 Xenopus tropicalis ENSXETG00000000334 I 0.836
g3bp1 Xenopus tropicalis ENSXETG00000010712 I 0.746