TNRC6B (Danio rerio)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSDARG00000074161 T36220_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000099717 RRM 1492 1556

Links

Other RRM family RBPs
Other Danio rerio RBPs

114 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s11561g1t1 Acyrtosiphon pisum DGIL_AUG5s11561g1t1 N 0.000
AAEL007436 Aedes aegypti AAEL007436 N 0.000
Ame_R017991 Ailuropoda melanoleuca Ame_R017991 N 0.785
Ame_R006400 Ailuropoda melanoleuca Ame_R006400 N 0.815
Ame_R002380 Ailuropoda melanoleuca Ame_R002380 N 0.892
TNRC6A Anolis carolinensis ENSACAG00000011857 N 0.785
TNRC6B Anolis carolinensis ENSACAG00000007281 N 0.908
TNRC6C Anolis carolinensis ENSACAG00000016198 N 0.815
AGAP007802 Anopheles gambiae AGAP007802 N 0.000
amel4_ncbi_hmm5263 Apis mellifera amel4_ncbi_hmm5263 N 0.000
BGIBMGA005589 Bombyx mori BGIBMGA005589 N 0.723
TNRC6B Bos taurus ENSBTAG00000021076 N 0.908
TNRC6C Bos taurus ENSBTAG00000018658 N 0.815
TNRC6A Bos taurus ENSBTAG00000017999 N 0.785
estExt_fgenesh2_pg.C_5340004 Branchiostoma floridae estExt_fgenesh2_pg.C_5340004 N 0.785
estExt_fgenesh2_pg.C_4930048 Branchiostoma floridae estExt_fgenesh2_pg.C_4930048 N 0.785
TNRC6C Callithrix jacchus ENSCJAG00000019431 N 0.815
TNRC6A Callithrix jacchus ENSCJAG00000020677 N 0.785
ENSCJAG00000031596 Callithrix jacchus ENSCJAG00000031596 N 0.908
TNRC6A Canis familiaris ENSCAFG00000017531 N 0.785
TNRC6B Canis familiaris ENSCAFG00000001255 N 0.908
TNRC6C Canis familiaris ENSCAFG00000005224 N 0.815
TNRC6C Cavia porcellus ENSCPOG00000000467 N 0.815
TNRC6B Cavia porcellus ENSCPOG00000005705 N 0.908
TNRC6A Choloepus hoffmanni ENSCHOG00000009374 N 0.785
TNRC6B Choloepus hoffmanni ENSCHOG00000010004 N 0.908
CpipJ_CPIJ010645 Culex pipiens CpipJ_CPIJ010645 N 0.000
CPIJ010645 Culex quinquefasciatus CPIJ010645 N 0.000
TNRC6C Danio rerio ENSDARG00000078036 N 0.831
TNRC6C Danio rerio ENSDARG00000076847 N 0.831
TNRC6B Danio rerio ENSDARG00000076389 N 0.908
TNRC6C Danio rerio ENSDARG00000076356 N 0.831
TNRC6A Danio rerio ENSDARG00000079688 N 0.785
PASA_GEN_0100279 Daphnia pulex PASA_GEN_0100279 N 0.754
TNRC6C Dasypus novemcinctus ENSDNOG00000003247 N 0.815
TNRC6B Dasypus novemcinctus ENSDNOG00000012744 N 0.892
Tnrc6b Dipodomys ordii ENSDORG00000003386 N 0.908
Tnrc6a Dipodomys ordii ENSDORG00000014734 N 0.785
TNRC6C Echinops telfairi ENSETEG00000005527 N 0.815
LOC100058134 Equus caballus ENSECAG00000012486 N 0.815
TNRC6B Equus caballus ENSECAG00000009759 N 0.908
TNRC6A Equus caballus ENSECAG00000025056 N 0.785
TNRC6B Erinaceus europaeus ENSEEUG00000008690 N 0.908
TNRC6C Felis catus ENSFCAG00000013005 N 0.815
TNRC6A Gallus gallus ENSGALG00000006068 N 0.785
TNRC6B Gallus gallus ENSGALG00000012050 N 0.892
TNRC6C Gallus gallus ENSGALG00000001725 N 0.815
TNRC6B Gasterosteus aculeatus ENSGACG00000004573 N 0.954
TNRC6C Gasterosteus aculeatus ENSGACG00000012320 N 0.831
TNRC6A Gasterosteus aculeatus ENSGACG00000014332 N 0.785
TNRC6B Gorilla gorilla ENSGGOG00000008444 N 0.908
TNRC6A Gorilla gorilla ENSGGOG00000005137 N 0.785
TNRC6C Gorilla gorilla ENSGGOG00000011304 N 0.815
TNRC6C Homo sapiens ENSG00000078687 N 0.815
TNRC6A Homo sapiens ENSG00000090905 N 0.785
TNRC6B Homo sapiens ENSG00000100354 N 0.908
TNRC6C Loxodonta africana ENSLAFG00000011122 N 0.815
TNRC6A Loxodonta africana ENSLAFG00000004209 N 0.785
TNRC6B Loxodonta africana ENSLAFG00000014473 N 0.908
TNRC6B Macaca mulatta ENSMMUG00000021345 N 0.908
TNRC6A Macaca mulatta ENSMMUG00000020428 N 0.785
TNRC6C Macaca mulatta ENSMMUG00000011924 N 0.815
TNRC6B Macropus eugenii ENSMEUG00000014438 N 0.754
TNRC6C Macropus eugenii ENSMEUG00000005104 N 0.815
TNRC6A Macropus eugenii ENSMEUG00000015959 N 0.785
TNRC6B Meleagris gallopavo ENSMGAG00000012333 N 0.892
TNRC6A Meleagris gallopavo ENSMGAG00000006455 N 0.785
TNRC6C Meleagris gallopavo ENSMGAG00000003906 N 0.815
TNRC6A Microcebus murinus ENSMICG00000001883 N 0.785
TNRC6C Microcebus murinus ENSMICG00000003952 N 0.815
TNRC6B Microcebus murinus ENSMICG00000014056 N 0.908
TNRC6A Monodelphis domestica ENSMODG00000016348 N 0.785
TNRC6C Monodelphis domestica ENSMODG00000001785 N 0.815
TNRC6B Monodelphis domestica ENSMODG00000008960 N 0.908
Tnrc6c Mus musculus ENSMUSG00000025571 N 0.815
Tnrc6b Mus musculus ENSMUSG00000047888 N 0.908
Tnrc6a Mus musculus ENSMUSG00000052707 N 0.785
TNRC6B Myotis lucifugus ENSMLUG00000008765 N 0.908
TNRC6A Ochotona princeps ENSOPRG00000005819 N 0.769
TNRC6B Ochotona princeps ENSOPRG00000012054 N 0.908
TNRC6A Ornithorhynchus anatinus ENSOANG00000007672 N 0.785
TNRC6C Ornithorhynchus anatinus ENSOANG00000009758 N 0.815
TNRC6A Oryctolagus cuniculus ENSOCUG00000004325 N 0.785
TNRC6B Oryctolagus cuniculus ENSOCUG00000016128 N 0.908
TNRC6A Oryzias latipes ENSORLG00000012798 N 0.754
TNRC6C Oryzias latipes ENSORLG00000009837 N 0.815
TNRC6B Oryzias latipes ENSORLG00000002794 N 0.923
TNRC6C Oryzias latipes ENSORLG00000003327 N 0.831
XR_024166.1 Pan troglodytes ENSPTRG00000014406 N 0.908
TNRC6C Pan troglodytes ENSPTRG00000009699 N 0.815
ENSPPYG00000007202 Pongo pygmaeus ENSPPYG00000007202 N 0.785
ENSPPYG00000008679 Pongo pygmaeus ENSPPYG00000008679 N 0.815
ENSPPYG00000011849 Pongo pygmaeus ENSPPYG00000011849 N 0.908
TNRC6C Procavia capensis ENSPCAG00000012510 N 0.815
TNRC6B Pteropus vampyrus ENSPVAG00000004975 N 0.908
Tnrc6a Rattus norvegicus ENSRNOG00000024737 N 0.785
Tnrc6b Rattus norvegicus ENSRNOG00000024907 N 0.908
TNRC6B Sorex araneus ENSSARG00000007971 N 0.908
TNRC6B Spermophilus tridecemlineatus ENSSTOG00000008927 N 0.908
TNRC6B Sus scrofa ENSSSCG00000000078 N 0.908
TNRC6B Taeniopygia guttata ENSTGUG00000010128 N 0.892
ENSTGUG00000010138 Taeniopygia guttata ENSTGUG00000010138 N 0.892
TNRC6A Taeniopygia guttata ENSTGUG00000006142 N 0.785
TNRC6C Taeniopygia guttata ENSTGUG00000007733 N 0.815
TNRC6B Takifugu rubripes ENSTRUG00000016987 N 0.954
TNRC6C Takifugu rubripes ENSTRUG00000011685 N 0.846
TNRC6C Takifugu rubripes ENSTRUG00000012583 N 0.815
TNRC6A Takifugu rubripes ENSTRUG00000009839 N 0.785
TNRC6B Tarsius syrichta ENSTSYG00000011836 N 0.908
TNRC6A Tarsius syrichta ENSTSYG00000012711 N 0.785
TNRC6C Tetraodon nigroviridis ENSTNIG00000005273 N 0.846
TNRC6C Tetraodon nigroviridis ENSTNIG00000004178 N 0.831
TNRC6A Tupaia belangeri ENSTBEG00000014965 N 0.785
TNRC6B Tupaia belangeri ENSTBEG00000017272 N 0.862
TNRC6B Tursiops truncatus ENSTTRG00000011465 N 0.908
TNRC6C Tursiops truncatus ENSTTRG00000010828 N 0.815
TNRC6A Tursiops truncatus ENSTTRG00000002008 N 0.785
tnrc6c Xenopus tropicalis ENSXETG00000019470 N 0.800