BGIBMGA005589 (Bombyx mori)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BGIBMGA005589 T54983_0.6 SilkDB (2008-Apr-11)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BGIBMGA005589 RRM 985 1049

Links

Other RRM family RBPs
Other Bombyx mori RBPs

61 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
DGIL_AUG5s11561g1t1 Acyrtosiphon pisum DGIL_AUG5s11561g1t1 N 0.846
GF19039 Drosophila ananassae FBgn0096051 N 0.831
GA16600-RA Drosophila pseudoobscura FBgn0076615 N 0.831
PASA_GEN_0100279 Daphnia pulex PASA_GEN_0100279 N 0.831
GL18179 Drosophila persimilis FBgn0155782 N 0.831
GD24374 Drosophila simulans FBgn0195715 N 0.815
GM26772 Drosophila sechellia FBgn0181625 N 0.815
gw Drosophila melanogaster FBgn0051992 N 0.815
AGAP007802 Anopheles gambiae AGAP007802 N 0.815
GJ14351 Drosophila virilis FBgn0201564 N 0.815
GG16439 Drosophila erecta FBgn0108670 N 0.800
GE14506 Drosophila yakuba FBgn0232110 N 0.800
GK13697 Drosophila willistoni FBgn0215705 N 0.800
GH23931 Drosophila grimshawi FBgn0131388 N 0.800
CpipJ_CPIJ010645 Culex pipiens CpipJ_CPIJ010645 N 0.769
AAEL801228 Aedes aegypti AAEL007447 N 0.769
amel4_ncbi_hmm5263 Apis mellifera amel4_ncbi_hmm5263 N 0.769
CPIJ010645 Culex quinquefasciatus CPIJ010645 N 0.769
AAEL007436 Aedes aegypti AAEL007436 N 0.754
AGAP007808 Anopheles gambiae AGAP007808 N 0.738
XR_024166.1 Pan troglodytes ENSPTRG00000014406 N 0.723
TNRC6B Pteropus vampyrus ENSPVAG00000004975 N 0.723
ENSPPYG00000011849 Pongo pygmaeus ENSPPYG00000011849 N 0.723
TNRC6B Oryctolagus cuniculus ENSOCUG00000016128 N 0.723
Tnrc6b Rattus norvegicus ENSRNOG00000024907 N 0.723
TNRC6B Ochotona princeps ENSOPRG00000012054 N 0.723
TNRC6B Sus scrofa ENSSSCG00000000078 N 0.723
TNRC6B Tursiops truncatus ENSTTRG00000011465 N 0.723
TNRC6B Tarsius syrichta ENSTSYG00000011836 N 0.723
TNRC6B Spermophilus tridecemlineatus ENSSTOG00000008927 N 0.723
Tnrc6b Mus musculus ENSMUSG00000047888 N 0.723
TNRC6B Sorex araneus ENSSARG00000007971 N 0.723
TNRC6B Myotis lucifugus ENSMLUG00000008765 N 0.723
TNRC6B Danio rerio ENSDARG00000074161 N 0.723
Tnrc6b Dipodomys ordii ENSDORG00000003386 N 0.723
TNRC6B Equus caballus ENSECAG00000009759 N 0.723
TNRC6B Monodelphis domestica ENSMODG00000008960 N 0.723
TNRC6B Cavia porcellus ENSCPOG00000005705 N 0.723
ENSCJAG00000031596 Callithrix jacchus ENSCJAG00000031596 N 0.723
TNRC6B Anolis carolinensis ENSACAG00000007281 N 0.723
TNRC6B Bos taurus ENSBTAG00000021076 N 0.723
TNRC6B Canis familiaris ENSCAFG00000001255 N 0.723
TNRC6B Choloepus hoffmanni ENSCHOG00000010004 N 0.723
TNRC6B Homo sapiens ENSG00000100354 N 0.723
TNRC6B Erinaceus europaeus ENSEEUG00000008690 N 0.723
TNRC6B Microcebus murinus ENSMICG00000014056 N 0.723
TNRC6B Macaca mulatta ENSMMUG00000021345 N 0.723
TNRC6B Loxodonta africana ENSLAFG00000014473 N 0.723
TNRC6B Gorilla gorilla ENSGGOG00000008444 N 0.723
TNRC6B Gasterosteus aculeatus ENSGACG00000007421 N 0.723
TNRC6B Gasterosteus aculeatus ENSGACG00000004573 N 0.723
TNRC6B Taeniopygia guttata ENSTGUG00000010128 N 0.708
estExt_fgenesh2_pg.C_4930048 Branchiostoma floridae estExt_fgenesh2_pg.C_4930048 N 0.708
AGAP007803 Anopheles gambiae AGAP007803 N 0.708
estExt_fgenesh2_pg.C_5340004 Branchiostoma floridae estExt_fgenesh2_pg.C_5340004 N 0.708
Ame_R002380 Ailuropoda melanoleuca Ame_R002380 N 0.708
TNRC6B Meleagris gallopavo ENSMGAG00000012333 N 0.708
TNRC6B Danio rerio ENSDARG00000076389 N 0.708
TNRC6B Gallus gallus ENSGALG00000012050 N 0.708
ENSTGUG00000010138 Taeniopygia guttata ENSTGUG00000010138 N 0.708
TNRC6B Dasypus novemcinctus ENSDNOG00000012744 N 0.708