CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TMEM63A
(
Monodelphis domestica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMODG00000005934
T39089_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000007341
RRM
233
271
LFITGLPKNTRKEVLESHFRDAYPTCTVVEVQLCYDVAK
ENSMODP00000007341
RRM
342
381
EHTVQDHPLGMAFVTFQESSMANFILKDFNACKCQGCRCK
ENSMODP00000035159
RRM
223
261
LFITGLPKNTRKEVLESHFRDAYPTCTVVEVQLCYDVAK
ENSMODP00000035159
RRM
332
371
EHTVQDHPLGMAFVTFQESSMANFILKDFNACKCQGCRCK
ENSMODP00000035160
RRM
218
256
LFITGLPKNTRKEVLESHFRDAYPTCTVVEVQLCYDVAK
ENSMODP00000035160
RRM
327
366
EHTVQDHPLGMAFVTFQESSMANFILKDFNACKCQGCRCK
Links
Other
RRM
family RBPs
Other
Monodelphis domestica
RBPs
22 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PBANKA_121020
Plasmodium berghei
PBANKA_121020
N
0.000