CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TMEM63A
(
Monodelphis domestica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMODG00000005934
T39089_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000007341
RRM
233
271
LFITGLPKNTRKEVLESHFRDAYPTCTVVEVQLCYDVAK
ENSMODP00000007341
RRM
342
381
EHTVQDHPLGMAFVTFQESSMANFILKDFNACKCQGCRCK
ENSMODP00000035159
RRM
223
261
LFITGLPKNTRKEVLESHFRDAYPTCTVVEVQLCYDVAK
ENSMODP00000035159
RRM
332
371
EHTVQDHPLGMAFVTFQESSMANFILKDFNACKCQGCRCK
ENSMODP00000035160
RRM
218
256
LFITGLPKNTRKEVLESHFRDAYPTCTVVEVQLCYDVAK
ENSMODP00000035160
RRM
327
366
EHTVQDHPLGMAFVTFQESSMANFILKDFNACKCQGCRCK
Links
Other
RRM
family RBPs
Other
Monodelphis domestica
RBPs
22 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TMEM63A
Macropus eugenii
ENSMEUG00000003227
N
0.938
LOC100057436
Equus caballus
ENSECAG00000018566
N
0.778
Tmem6
Rattus norvegicus
ENSRNOG00000003310
N
0.750
TMEM63A
Microcebus murinus
ENSMICG00000004058
N
0.747
TMEM63A
Otolemur garnettii
ENSOGAG00000010346
N
0.744
A7MB88_BOVIN
Bos taurus
ENSBTAG00000002854
N
0.744
TMEM63A
Pteropus vampyrus
ENSPVAG00000004786
N
0.741
TMEM63A
Sus scrofa
ENSSSCG00000010854
N
0.741
TMEM63A
Felis catus
ENSFCAG00000006966
N
0.738
TMEM63A
Myotis lucifugus
ENSMLUG00000016338
N
0.738
Tmem63a
Mus musculus
ENSMUSG00000026519
N
0.738
TMEM63A
Echinops telfairi
ENSETEG00000012297
N
0.732
TMEM63A
Tursiops truncatus
ENSTTRG00000010132
N
0.728
TMEM63A
Callithrix jacchus
ENSCJAG00000012604
N
0.716
TMEM63A
Homo sapiens
ENSG00000196187
N
0.716
TMEM63A
Gorilla gorilla
ENSGGOG00000000862
N
0.716
XR_022984.1
Pan troglodytes
ENSPTRG00000002040
N
0.716
TMEM63A
Ochotona princeps
ENSOPRG00000012151
N
0.713
TMEM63A
Loxodonta africana
ENSLAFG00000017739
N
0.709
TMEM63A
Oryctolagus cuniculus
ENSOCUG00000001907
N
0.704
TMEM63A
Ornithorhynchus anatinus
ENSOANG00000001474
N
0.700