CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TMEM63A
(
Macropus eugenii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMEUG00000003227
T38172_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000002951
RRM
229
267
LFITGLPKNTRKEMLESHFRDAYPTCTVVEVQLCYDVAK
ENSMEUP00000002951
RRM
337
377
EECTVQDHPLGMAFVTFQEHSMATFILKDFNACKCQGCRCK
Links
Other
RRM
family RBPs
Other
Macropus eugenii
RBPs
23 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TMEM63A
Monodelphis domestica
ENSMODG00000005934
N
0.938
LOC100057436
Equus caballus
ENSECAG00000018566
N
0.802
Tmem6
Rattus norvegicus
ENSRNOG00000003310
N
0.787
TMEM63A
Microcebus murinus
ENSMICG00000004058
N
0.783
TMEM63A
Echinops telfairi
ENSETEG00000012297
N
0.780
A7MB88_BOVIN
Bos taurus
ENSBTAG00000002854
N
0.780
TMEM63A
Sus scrofa
ENSSSCG00000010854
N
0.778
TMEM63A
Pteropus vampyrus
ENSPVAG00000004786
N
0.776
TMEM63A
Otolemur garnettii
ENSOGAG00000010346
N
0.768
TMEM63A
Tursiops truncatus
ENSTTRG00000010132
N
0.765
TMEM63A
Felis catus
ENSFCAG00000006966
N
0.762
Tmem63a
Mus musculus
ENSMUSG00000026519
N
0.762
TMEM63A
Myotis lucifugus
ENSMLUG00000016338
N
0.750
TMEM63A
Loxodonta africana
ENSLAFG00000017739
N
0.744
TMEM63A
Callithrix jacchus
ENSCJAG00000012604
N
0.741
TMEM63A
Gorilla gorilla
ENSGGOG00000000862
N
0.741
XR_022984.1
Pan troglodytes
ENSPTRG00000002040
N
0.741
TMEM63A
Homo sapiens
ENSG00000196187
N
0.741
TMEM63A
Ochotona princeps
ENSOPRG00000012151
N
0.738
TMEM63A
Oryctolagus cuniculus
ENSOCUG00000001907
N
0.728
Ame_R015338
Ailuropoda melanoleuca
Ame_R015338
N
0.725
TMEM63A
Ornithorhynchus anatinus
ENSOANG00000001474
N
0.713
TMEM63A
Dasypus novemcinctus
ENSDNOG00000024203
N
0.704