CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TMEM63A
(
Ornithorhynchus anatinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOANG00000001474
T39442_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000002346
RRM
246
280
LFITGLPRDVQKEAVENHFRDAYPTCRVVEVQLCY
ENSOANP00000002346
RRM
354
394
EEQAVQNHPLGMAFVTFQDKLMAKYILKDFNACKCQGCLCQ
ENSOANP00000002348
RRM
192
226
LFITGLPRDVQKEAVENHFRDAYPTCRVVEVQLCY
ENSOANP00000002348
RRM
300
340
EEQAVQNHPLGMAFVTFQDKLMAKYILKDFNACKCQGCLCQ
Links
Other
RRM
family RBPs
Other
Ornithorhynchus anatinus
RBPs
19 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TMEM63A
Myotis lucifugus
ENSMLUG00000016338
N
0.756
TMEM63A
Tursiops truncatus
ENSTTRG00000010132
N
0.738
TMEM63A
Microcebus murinus
ENSMICG00000004058
N
0.735
LOC100057436
Equus caballus
ENSECAG00000018566
N
0.728
TMEM63A
Sus scrofa
ENSSSCG00000010854
N
0.725
TMEM63A
Homo sapiens
ENSG00000196187
N
0.725
TMEM63A
Gorilla gorilla
ENSGGOG00000000862
N
0.725
XR_022984.1
Pan troglodytes
ENSPTRG00000002040
N
0.725
TMEM63A
Felis catus
ENSFCAG00000006966
N
0.725
Ame_R015338
Ailuropoda melanoleuca
Ame_R015338
N
0.722
TMEM63A
Echinops telfairi
ENSETEG00000012297
N
0.720
Tmem63a
Mus musculus
ENSMUSG00000026519
N
0.718
TMEM63A
Oryctolagus cuniculus
ENSOCUG00000001907
N
0.713
TMEM63A
Macropus eugenii
ENSMEUG00000003227
N
0.713
TMEM63A
Ochotona princeps
ENSOPRG00000012151
N
0.709
Tmem6
Rattus norvegicus
ENSRNOG00000003310
N
0.705
TMEM63A
Callithrix jacchus
ENSCJAG00000012604
N
0.704
TMEM63A
Monodelphis domestica
ENSMODG00000005934
N
0.700