CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TMEM63A
(
Loxodonta africana
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSLAFG00000017739
T38084_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000014875
RRM
231
268
LFITGLPRDANKEKVESHFRDAYPTCQVVEVQLCYNVA
ENSLAFP00000014875
RRM
332
379
LMEKIAEEECRVQYQPLGMAFVTFQEKSMATHILKDFNACKCQGLQCK
ENSLAFP00000019048
RRM
211
248
LFITGLPRDANKEKVESHFRDAYPTCQVVEVQLCYNVA
ENSLAFP00000019048
RRM
313
360
LMEKIAEEECRVQYQPLGMAFVTFQEKSMATHILKDFNACKCQGLQCK
ENSLAFP00000027615
RRM
221
258
LFITGLPRDANKEKVESHFRDAYPTCQVVEVQLCYNVA
ENSLAFP00000027615
RRM
323
370
LMEKIAEEECRVQYQPLGMAFVTFQEKSMATHILKDFNACKCQGLQCK
Links
Other
RRM
family RBPs
Other
Loxodonta africana
RBPs
23 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TMEM63A
Tursiops truncatus
ENSTTRG00000010132
N
0.837
TMEM63A
Echinops telfairi
ENSETEG00000012297
N
0.837
TMEM63A
Pteropus vampyrus
ENSPVAG00000004786
N
0.828
TMEM63A
Microcebus murinus
ENSMICG00000004058
N
0.826
TMEM63A
Sus scrofa
ENSSSCG00000010854
N
0.826
A7MB88_BOVIN
Bos taurus
ENSBTAG00000002854
N
0.816
LOC100057436
Equus caballus
ENSECAG00000018566
N
0.805
TMEM63A
Gorilla gorilla
ENSGGOG00000000862
N
0.791
XR_022984.1
Pan troglodytes
ENSPTRG00000002040
N
0.791
TMEM63A
Homo sapiens
ENSG00000196187
N
0.791
TMEM63A
Oryctolagus cuniculus
ENSOCUG00000001907
N
0.779
TMEM63A
Callithrix jacchus
ENSCJAG00000012604
N
0.779
TMEM63A
Myotis lucifugus
ENSMLUG00000016338
N
0.779
TMEM63A
Felis catus
ENSFCAG00000006966
N
0.767
Tmem6
Rattus norvegicus
ENSRNOG00000003310
N
0.767
Ame_R015338
Ailuropoda melanoleuca
Ame_R015338
N
0.767
TMEM63A
Ochotona princeps
ENSOPRG00000012151
N
0.756
Tmem63a
Mus musculus
ENSMUSG00000026519
N
0.756
TMEM63A
Otolemur garnettii
ENSOGAG00000010346
N
0.747
TMEM63A
Dasypus novemcinctus
ENSDNOG00000024203
N
0.744
TMEM63A
Macropus eugenii
ENSMEUG00000003227
N
0.744
TMEM63A
Monodelphis domestica
ENSMODG00000005934
N
0.709