SLTM (Pteropus vampyrus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPVAG00000015056 T40964_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000014193 RRM 386 456

Links

Other RRM family RBPs
Other Pteropus vampyrus RBPs

115 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh2_kg.C_60291 Agaricus bisporus estExt_fgenesh2_kg.C_60291 N 0.000
AMAG_05802 Allomyces macrogynus AMAG_05802 N 0.000
AMAG_12234 Allomyces macrogynus AMAG_12234 N 0.000
BC1G_15234 Botrytis cinerea BC1G_15234 N 0.000
CHGG_07192 Chaetomium globosum CHGG_07192 N 0.000
CPSG_03009 Coccidioides posadasii CPSG_03009 N 0.000
GLRG_03342 Colletotrichum graminicola GLRG_03342 N 0.000
CC1G_00892 Coprinopsis cinerea CC1G_00892 N 0.000
estExt_fgenesh1_pg.C_70305 Cryphonectria parasitica estExt_fgenesh1_pg.C_70305 N 0.000
CNBG_0786 Cryptococcus neoformans CNBG_0786 N 0.000
estExtDG_Genemark1.C_1080017 Emiliania huxleyi estExtDG_Genemark1.C_1080017 N 0.000
estExt_fgenesh2_pm.C_60269 Heterobasidion annosum estExt_fgenesh2_pm.C_60269 N 0.000
eu2.Lbscf0002g03430 Laccaria bicolor eu2.Lbscf0002g03430 N 0.000
MGG_09536 Magnaporthe oryzae MGG_09536 N 0.000
EDP43343.1 Malassezia globosa EDP43343.1 N 0.000
MCYG_01387 Microsporum canis MCYG_01387 N 0.000
MGYG_01930 Microsporum gypseum MGYG_01930 N 0.000
estExt_fgeneshMC_pg.C_60156 Mucor circinelloides estExt_fgeneshMC_pg.C_60156 N 0.000
estExt_fgenesh1_pm.C_30270 Myceliophthora thermophila estExt_fgenesh1_pm.C_30270 N 0.000
estExt_fgenesh1_pm.C_120018 Mycosphaerella fijiensis estExt_fgenesh1_pm.C_120018 N 0.000
NCU06718 Neurospora crassa NCU06718 N 0.000
estExt_Genewise1.C_11798 Neurospora discreta estExt_Genewise1.C_11798 N 0.000
fgenesh1_pm.C_scaffold_1000464 Neurospora tetrasperma fgenesh1_pm.C_scaffold_1000464 N 0.000
Pc21g11350 Penicillium chrysogenum Pc21g11350 N 0.000
PMAA_028520 Penicillium marneffei PMAA_028520 N 0.000
e_gwh2.3.362.1 Phanerochaete chrysosporium e_gwh2.3.362.1 N 0.000
fgeneshPB_pg.4__237 Phycomyces blakesleeanus fgeneshPB_pg.4__237 N 0.000
estExt_Genewise1.C_60832 Pleurotus ostreatus estExt_Genewise1.C_60832 N 0.000
PredSwiss_ASS2010_1894.1 Pneumocystis carinii PredSwiss_ASS2010_1894.1 N 0.000
PredSwiss_CON2858.1 Pneumocystis carinii PredSwiss_CON2858.1 N 0.000
PredSwiss_CON1061.1 Pneumocystis carinii PredSwiss_CON1061.1 N 0.000
Pa_2_10770 Podospora anserina Pa_2_10770 N 0.000
e_gw1.311.2.1 Postia placenta e_gw1.311.2.1 N 0.000
e_gw1.135.14.1 Postia placenta e_gw1.135.14.1 N 0.000
RO3G_12479 Rhizopus oryzae RO3G_12479 N 0.000
gw1.4.1338.1 Schizophyllum commune gw1.4.1338.1 N 0.000
SJAG_02668 Schizosaccharomyces japonicus SJAG_02668 N 0.000
SPBP8B7.15c Schizosaccharomyces pombe SPBP8B7.15c N 0.000
SS1G_05474 Sclerotinia sclerotiorum SS1G_05474 N 0.000
Genemark.8861_g Serpula lacrymans Genemark.8861_g N 0.000
SPPG_06553 Spizellomyces punctatus SPPG_06553 N 0.000
estExt_fgenesh1_pg.C_130086 Sporobolomyces roseus estExt_fgenesh1_pg.C_130086 N 0.000
estExt_Genewise1Plus.C_22631 Thielavia terrestris estExt_Genewise1Plus.C_22631 N 0.000
fgeneshTM_pm.1_#_792 Tremella mesenterica fgeneshTM_pm.1_#_792 N 0.000
TEQG_07175 Trichophyton equinum TEQG_07175 N 0.000
TERG_04664 Trichophyton rubrum TERG_04664 N 0.000
TESG_06028 Trichophyton tonsurans TESG_06028 N 0.000
estExt_fgeneshTA2_pg.C_20820 Trichoplax adhaerens estExt_fgeneshTA2_pg.C_20820 N 0.000
GSTUMT00011325001 Tuber melanosporum GSTUMT00011325001 N 0.000
UREG_05672 Uncinocarpus reesii UREG_05672 N 0.000
VDBG_00415 Verticillium albo atrum VDBG_00415 N 0.000
VDAG_00026 Verticillium dahliae VDAG_00026 N 0.000