RBM23 (Spermophilus tridecemlineatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSTOG00000010354 T41629_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000009304 RRM 168 236
ENSSTOP00000009304 RRM 265 335

Links

Other RRM family RBPs
Other Spermophilus tridecemlineatus RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Ame_R014613 Ailuropoda melanoleuca Ame_R014613 N 0.836
RBM23 Anolis carolinensis ENSACAG00000001569 N 0.800
Q0IIK8_BOVIN Bos taurus ENSBTAG00000038333 N 0.821
RBM23 Callithrix jacchus ENSCJAG00000008482 N 0.821
B0KWM7_CALJA Callithrix jacchus ENSCJAG00000017535 N 0.757
RBM23 Canis familiaris ENSCAFG00000011217 N 0.836
ENSDORG00000004926 Dipodomys ordii ENSDORG00000004926 N 0.836
LOC100052786 Equus caballus ENSECAG00000009910 N 0.836
RBM23 Erinaceus europaeus ENSEEUG00000015560 N 0.814
RBM39 Erinaceus europaeus ENSEEUG00000004390 N 0.757
RBM23 Gorilla gorilla ENSGGOG00000015707 N 0.836
RBM23 Homo sapiens ENSG00000100461 N 0.836
RBM39 Homo sapiens ENSG00000131051 N 0.757
RBM23 Loxodonta africana ENSLAFG00000018567 N 0.829
LOC710066 Macaca mulatta ENSMMUG00000018381 N 0.836
RBM23 Microcebus murinus ENSMICG00000006364 N 0.829
RBM23 Monodelphis domestica ENSMODG00000024448 N 0.836
Rbm39 Mus musculus ENSMUSG00000027620 N 0.757
RBM23 Myotis lucifugus ENSMLUG00000012923 N 0.807
RBM23 Ochotona princeps ENSOPRG00000001092 N 0.787
RBM39 Ochotona princeps ENSOPRG00000002183 N 0.757
RBM23 Oryctolagus cuniculus ENSOCUG00000002006 N 0.801
RBM23 Oryzias latipes ENSORLG00000010370 N 0.764
RBM23 Pan troglodytes ENSPTRG00000006151 N 0.836
ENSPPYG00000005649 Pongo pygmaeus ENSPPYG00000005649 N 0.836
RBM23 Pteropus vampyrus ENSPVAG00000013785 N 0.829
RBM23 Sorex araneus ENSSARG00000005165 N 0.793
RBM23 Takifugu rubripes ENSTRUG00000011352 N 0.764
RBM23 Tursiops truncatus ENSTTRG00000001500 N 0.836
RBM39 Vicugna pacos ENSVPAG00000003819 N 0.750
AAH73374 Xenopus laevis AAH73374 N 0.779
rbm23 Xenopus tropicalis ENSXETG00000022623 N 0.800