RBM23 (Spermophilus tridecemlineatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSSTOG00000010354 T41629_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000009304 RRM 168 236
ENSSTOP00000009304 RRM 265 335

Links

Other RRM family RBPs
Other Spermophilus tridecemlineatus RBPs

32 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002866061.1 Arabidopsis lyrata fgenesh2_kg.8__1470__AT5G55670.1 N 0.000
AT5G55670 Arabidopsis thaliana AT5G55670-TAIR-G N 0.000
BRADI4G33020 Brachypodium distachyon BRADI4G33020 N 0.000
BRADI3G38990 Brachypodium distachyon BRADI3G38990 N 0.000
PK06988.1 Cannabis sativa PK06988.1 N 0.000
PK28815.1 Cannabis sativa PK28815.1 N 0.000
Cucsa.059360 Cucumis sativus Cucsa.059360 N 0.000
Glyma18g08590.1 Glycine max Glyma18g08590.1 N 0.000
Glyma18g08610.1 Glycine max Glyma18g08610.1 N 0.000
Glyma08g44170.1 Glycine max Glyma08g44170.1 N 0.000
Glyma08g44150.1 Glycine max Glyma08g44150.1 N 0.000
chr6.CM0245.280.nd Lotus japonicus chr6.CM0245.280.nd N 0.000
MDP0000642690 Malus x domestica MDP0000642690 N 0.000
MDP0000138972 Malus x domestica MDP0000138972 N 0.000
MDP0000162382 Malus x domestica MDP0000162382 N 0.000
MDP0000551492 Malus x domestica MDP0000551492 N 0.000
MDP0000643975 Malus x domestica MDP0000643975 N 0.000
MDP0000491894 Malus x domestica MDP0000491894 N 0.000
cassava35777.valid.m1 Manihot esculenta cassava35777.valid.m1 N 0.000
cassava7045.valid.m1 Manihot esculenta cassava7045.valid.m1 N 0.000
mgf006948m Mimulus guttatus mgf006948m N 0.000
BGIOSIBCE030316 Oryza indica BGIOSIBCE030316 N 0.000
BGIOSIBCE028312 Oryza indica BGIOSIBCE028312 N 0.000
LOC_Os08g38240 Oryza sativa LOC_Os08g38240 N 0.000
LOC_Os09g29980 Oryza sativa LOC_Os09g29980 N 0.000
PDK_20s1577201g001 Phoenix dactylifera PDK_20s1577201g001 N 0.000
e_gw1.42.153.1 Physcomitrella patens e_gw1.42.153.1 N 0.000
e_gw1.138.6.1 Physcomitrella patens e_gw1.138.6.1 N 0.000
B9HLD1_POPTR Populus trichocarpa POPTR_0008s18280 N 0.000
B9HTF7_POPTR Populus trichocarpa POPTR_0010s06150 N 0.000
ppa002814m Prunus persica ppa002814m N 0.000
ppa002096m Prunus persica ppa002096m N 0.000
29629.m001380 Ricinus communis 29629.m001380 N 0.000
29929.m004777 Ricinus communis 29929.m004777 N 0.000
SB07G028810 Sorghum bicolor Sb07g028810 N 0.000
GRMZM2G107163 Zea mays GRMZM2G107163 N 0.000
GRMZM2G475495 Zea mays GRMZM2G475495 N 0.000
GRMZM2G131957 Zea mays GRMZM2G131957 N 0.000