RBM39 (Erinaceus europaeus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSEEUG00000004390 T36761_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSEEUP00000004003 RRM 155 223
ENSEEUP00000004003 RRM 252 322

Links

Other RRM family RBPs
Other Erinaceus europaeus RBPs

37 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
B0KWM7_CALJA Callithrix jacchus ENSCJAG00000017535 N 1.000
Rbm39 Mus musculus ENSMUSG00000027620 N 1.000
RBM39 Homo sapiens ENSG00000131051 N 1.000
RBM39 Ochotona princeps ENSOPRG00000002183 N 1.000
RBM39 Vicugna pacos ENSVPAG00000003819 N 0.993
RBM23 Takifugu rubripes ENSTRUG00000011352 N 0.900
RBM23 Oryzias latipes ENSORLG00000010370 N 0.900
RBM23 Canis familiaris ENSCAFG00000011217 N 0.879
RBM23 Tursiops truncatus ENSTTRG00000001500 N 0.879
ENSPPYG00000005649 Pongo pygmaeus ENSPPYG00000005649 N 0.879
Ame_R014613 Ailuropoda melanoleuca Ame_R014613 N 0.879
LOC710066 Macaca mulatta ENSMMUG00000018381 N 0.879
RBM23 Gorilla gorilla ENSGGOG00000015707 N 0.879
LOC100052786 Equus caballus ENSECAG00000009910 N 0.879
RBM23 Homo sapiens ENSG00000100461 N 0.879
Q0IIK8_BOVIN Bos taurus ENSBTAG00000038333 N 0.871
RBM23 Microcebus murinus ENSMICG00000006364 N 0.871
RBM23 Pteropus vampyrus ENSPVAG00000013785 N 0.871
ENSDORG00000004926 Dipodomys ordii ENSDORG00000004926 N 0.871
RBM23 Pan troglodytes ENSPTRG00000006151 N 0.871
RBM23 Callithrix jacchus ENSCJAG00000008482 N 0.864
RBM23 Oryctolagus cuniculus ENSOCUG00000002006 N 0.858
rbm23 Xenopus tropicalis ENSXETG00000022623 N 0.857
RBM23 Loxodonta africana ENSLAFG00000018567 N 0.857
RBM23 Monodelphis domestica ENSMODG00000024448 N 0.857
RBM23 Ochotona princeps ENSOPRG00000001092 N 0.851
RBM23 Sorex araneus ENSSARG00000005165 N 0.850
RBM23 Myotis lucifugus ENSMLUG00000012923 N 0.850
RBM23 Erinaceus europaeus ENSEEUG00000015560 N 0.850
RBM23 Anolis carolinensis ENSACAG00000001569 N 0.836
AAH73374 Xenopus laevis AAH73374 N 0.829
BGIBMGA006208 Bombyx mori BGIBMGA006208 N 0.771
RBM23 Spermophilus tridecemlineatus ENSSTOG00000010354 N 0.757
RBM23 Felis catus ENSFCAG00000006632 N 0.721
RBM23 Tarsius syrichta ENSTSYG00000014755 N 0.721
RBM23 Vicugna pacos ENSVPAG00000000599 N 0.707
RBM23 Choloepus hoffmanni ENSCHOG00000004460 N 0.707