CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM23
(
Microcebus murinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMICG00000006364
T38507_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMICP00000005804
RRM
171
238
VFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNRRSKGIAYVEFCEIQSVPLAIGLTGQRLLGVPI
ENSMICP00000005804
RRM
267
337
LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMR
Links
Other
RRM
family RBPs
Other
Microcebus murinus
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM23
Gorilla gorilla
ENSGGOG00000015707
N
0.993
RBM23
Homo sapiens
ENSG00000100461
N
0.993
ENSPPYG00000005649
Pongo pygmaeus
ENSPPYG00000005649
N
0.993
LOC100052786
Equus caballus
ENSECAG00000009910
N
0.993
RBM23
Tursiops truncatus
ENSTTRG00000001500
N
0.993
LOC710066
Macaca mulatta
ENSMMUG00000018381
N
0.993
Ame_R014613
Ailuropoda melanoleuca
Ame_R014613
N
0.993
RBM23
Canis familiaris
ENSCAFG00000011217
N
0.993
ENSDORG00000004926
Dipodomys ordii
ENSDORG00000004926
N
0.986
RBM23
Pteropus vampyrus
ENSPVAG00000013785
N
0.986
RBM23
Pan troglodytes
ENSPTRG00000006151
N
0.986
RBM23
Callithrix jacchus
ENSCJAG00000008482
N
0.979
RBM23
Monodelphis domestica
ENSMODG00000024448
N
0.971
Q0IIK8_BOVIN
Bos taurus
ENSBTAG00000038333
N
0.971
RBM23
Erinaceus europaeus
ENSEEUG00000015560
N
0.964
RBM23
Myotis lucifugus
ENSMLUG00000012923
N
0.964
RBM23
Oryctolagus cuniculus
ENSOCUG00000002006
N
0.957
RBM23
Loxodonta africana
ENSLAFG00000018567
N
0.957
RBM23
Sorex araneus
ENSSARG00000005165
N
0.950
RBM23
Ochotona princeps
ENSOPRG00000001092
N
0.936
RBM23
Anolis carolinensis
ENSACAG00000001569
N
0.929
rbm23
Xenopus tropicalis
ENSXETG00000022623
N
0.914
AAH73374
Xenopus laevis
AAH73374
N
0.893
RBM23
Takifugu rubripes
ENSTRUG00000011352
N
0.871
RBM39
Erinaceus europaeus
ENSEEUG00000004390
N
0.871
RBM23
Oryzias latipes
ENSORLG00000010370
N
0.871
B0KWM7_CALJA
Callithrix jacchus
ENSCJAG00000017535
N
0.871
Rbm39
Mus musculus
ENSMUSG00000027620
N
0.871
RBM39
Ochotona princeps
ENSOPRG00000002183
N
0.871
RBM39
Homo sapiens
ENSG00000131051
N
0.871
RBM39
Vicugna pacos
ENSVPAG00000003819
N
0.864
RBM23
Spermophilus tridecemlineatus
ENSSTOG00000010354
N
0.829
RBM23
Felis catus
ENSFCAG00000006632
N
0.814
RBM23
Tarsius syrichta
ENSTSYG00000014755
N
0.814
RBM23
Choloepus hoffmanni
ENSCHOG00000004460
N
0.800
RBM23
Vicugna pacos
ENSVPAG00000000599
N
0.793
RBM23
Dasypus novemcinctus
ENSDNOG00000002569
N
0.779
RBM23
Macropus eugenii
ENSMEUG00000014548
N
0.743
BGIBMGA006208
Bombyx mori
BGIBMGA006208
N
0.743