CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPA0
(
Taeniopygia guttata
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTGUG00000001186
T41848_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000001222
RRM
8
77
IFIGGINVQSTKAGLREQFAAYGTLTDCVVVLNPQTKRSRCFGFVTYSAVEEADAAMAASPHAVDGNAVE
ENSTGUP00000001222
RRM
99
167
LFVGGLKGDVGEGVLMQHFSQFGPEKAEIISDKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE
ENSTGUP00000001223
RRM
9
78
IFIGGINVQSTKAGLREQFAAYGTLTDCVVVLNPQTKRSRCFGFVTYSAVEEADAAMAASPHAVDGNAVE
ENSTGUP00000001223
RRM
100
168
LFVGGLKGDVGEGVLMQHFSQFGPEKAEIISDKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVE
Links
Other
RRM
family RBPs
Other
Taeniopygia guttata
RBPs
28 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R010989
Ailuropoda melanoleuca
Ame_R010989
N
0.857
A1L532_BOVIN
Bos taurus
ENSBTAG00000016929
N
0.857
LOC100399260
Callithrix jacchus
ENSCJAG00000006112
N
0.850
HNRNPA0
Canis familiaris
ENSCAFG00000001132
N
0.857
HNRNPA0
Cavia porcellus
ENSCPOG00000026092
N
0.857
HNRNPA0
Gallus gallus
ENSGALG00000006160
N
0.929
HNRNPA0
Gorilla gorilla
ENSGGOG00000023303
N
0.857
HNRNPA0
Homo sapiens
ENSG00000177733
N
0.857
HNRNPA0
Loxodonta africana
ENSLAFG00000028290
N
0.857
HNRNPA0
Macaca mulatta
ENSMMUG00000011929
N
0.857
ENSMEUG00000013675
Macropus eugenii
ENSMEUG00000013675
N
0.850
HNRNPA0
Meleagris gallopavo
ENSMGAG00000007915
N
0.929
XM_001373740.1
Monodelphis domestica
ENSMODG00000002463
N
0.700
HNRNPA0
Monodelphis domestica
ENSMODG00000014720
N
0.850
Hnrnpa0
Mus musculus
ENSMUSG00000007836
N
0.850
HNRNPA0
Ornithorhynchus anatinus
ENSOANG00000012169
N
0.807
HNRNPA0
Oryctolagus cuniculus
ENSOCUG00000005703
N
0.857
HNRNPA0
Pan troglodytes
ENSPTRG00000017273
N
0.857
ENSPPYG00000015814
Pongo pygmaeus
ENSPPYG00000015814
N
0.857
Hnrnpa0
Rattus norvegicus
ENSRNOG00000039876
N
0.836
HNRNPA0
Sus scrofa
ENSSSCG00000014322
N
0.857
HNRNPA0
Tursiops truncatus
ENSTTRG00000000499
N
0.857
AAH41277
Xenopus laevis
AAH41277
N
0.743
AAH45023
Xenopus laevis
AAH45023
N
0.736
AAH71067
Xenopus laevis
AAH71067
N
0.743
AAI06306
Xenopus laevis
AAI06306
N
0.743
hnrnpa0
Xenopus tropicalis
ENSXETG00000003833
N
0.764