CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPA0
(
Ornithorhynchus anatinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOANG00000012169
T39543_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000019273
RRM
2
66
LNVQTSESGPRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDGNTVE
ENSOANP00000019273
RRM
88
157
LFVGGLKGDVAEDDLVEHFSQFGPVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIHGHRVE
Links
Other
RRM
family RBPs
Other
Ornithorhynchus anatinus
RBPs
28 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HNRNPA0
Monodelphis domestica
ENSMODG00000014720
N
0.936
ENSMEUG00000013675
Macropus eugenii
ENSMEUG00000013675
N
0.936
Hnrnpa0
Mus musculus
ENSMUSG00000007836
N
0.929
HNRNPA0
Cavia porcellus
ENSCPOG00000026092
N
0.921
HNRNPA0
Canis familiaris
ENSCAFG00000001132
N
0.921
HNRNPA0
Homo sapiens
ENSG00000177733
N
0.921
HNRNPA0
Loxodonta africana
ENSLAFG00000028290
N
0.921
HNRNPA0
Macaca mulatta
ENSMMUG00000011929
N
0.921
HNRNPA0
Oryctolagus cuniculus
ENSOCUG00000005703
N
0.921
HNRNPA0
Gorilla gorilla
ENSGGOG00000023303
N
0.921
A1L532_BOVIN
Bos taurus
ENSBTAG00000016929
N
0.921
HNRNPA0
Sus scrofa
ENSSSCG00000014322
N
0.921
Hnrnpa0
Rattus norvegicus
ENSRNOG00000039876
N
0.921
HNRNPA0
Pan troglodytes
ENSPTRG00000017273
N
0.921
ENSPPYG00000015814
Pongo pygmaeus
ENSPPYG00000015814
N
0.921
Ame_R010989
Ailuropoda melanoleuca
Ame_R010989
N
0.921
HNRNPA0
Tursiops truncatus
ENSTTRG00000000499
N
0.921
LOC100399260
Callithrix jacchus
ENSCJAG00000006112
N
0.914
HNRNPA0
Gallus gallus
ENSGALG00000006160
N
0.864
HNRNPA0
Meleagris gallopavo
ENSMGAG00000007915
N
0.864
HNRNPA0
Taeniopygia guttata
ENSTGUG00000001186
N
0.807
hnrnpa0
Xenopus tropicalis
ENSXETG00000003833
N
0.764
AAI06306
Xenopus laevis
AAI06306
N
0.757
AAH41277
Xenopus laevis
AAH41277
N
0.757
AAH71067
Xenopus laevis
AAH71067
N
0.757
AAH45023
Xenopus laevis
AAH45023
N
0.750
XM_001373740.1
Monodelphis domestica
ENSMODG00000002463
N
0.714
ENSMEUG00000008352
Macropus eugenii
ENSMEUG00000008352
N
0.703