CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GF23028
(
Drosophila ananassae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0100022
T43300_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0126220
RRM
191
259
VRISNLSESMTETDLEELVKKIGPHTKMYLAREKNTGLCKGFAYVHFKFRQDAAAAIEILNGHGYDHLI
Links
Other
RRM
family RBPs
Other
Drosophila ananassae
RBPs
34 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ACLA_034850
Aspergillus clavatus
CADACLAG00004062
N
0.000
AFLA_101100
Aspergillus flavus
CADAFLAG00011847
N
0.000
AFUA_3G06890
Aspergillus fumigatus
CADAFUAG00005682
N
0.000
ANIA_04799
Aspergillus nidulans
CADANIAG00005622
N
0.000
AO090020000304
Aspergillus oryzae
CADAORAG00006798
N
0.000
ATEG_08730
Aspergillus terreus
CADATEAG00006712
N
0.000
CPSG_05134
Coccidioides posadasii
CPSG_05134
N
0.000
GLRG_04675
Colletotrichum graminicola
GLRG_04675
N
0.000
estExt_fgenesh1_kg.C_40113
Cryphonectria parasitica
estExt_fgenesh1_kg.C_40113
N
0.000
HCAG_07243
Histoplasma capsulatum
HCAG_07243
N
0.000
MCYG_08048
Microsporum canis
MCYG_08048
N
0.000
MGYG_05499
Microsporum gypseum
MGYG_05499
N
0.000
NFIA_070360
Neosartorya fischeri
CADNFIAG00005684
N
0.000
NCU02152
Neurospora crassa
NCU02152
N
0.000
fgenesh3_pm.C_scaffold_2000208
Neurospora discreta
fgenesh3_pm.C_scaffold_2000208
N
0.000
estExt_fgenesh1_pg.C_70148
Neurospora tetrasperma
estExt_fgenesh1_pg.C_70148
N
0.000
PABG_00859
Paracoccidioides brasiliensis
PABG_00859
N
0.000
PMAA_002860
Penicillium marneffei
PMAA_002860
N
0.000
Pa_1_17560
Podospora anserina
Pa_1_17560
N
0.000
GSTUMT00002679001
Tuber melanosporum
GSTUMT00002679001
N
0.000
UREG_00439
Uncinocarpus reesii
UREG_00439
N
0.000