LOC_Os08g31810 (Oryza sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 LOC_Os08g31810 T45107_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os08g31810.1 RRM 56 126
LOC_Os08g31810.2 RRM 56 126
LOC_Os08g31810.3 RRM 56 126

Links

Other RRM family RBPs
Other Oryza sativa RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
XM_002871058.1 Arabidopsis lyrata scaffold_600404.1 N 0.704
AT5G04600 Arabidopsis thaliana AT5G04600-TAIR-G N 0.704
BRADI3G35650 Brachypodium distachyon BRADI3G35650 N 0.944
PK02111.1 Cannabis sativa PK02111.1 N 0.775
CC1G_06273 Coprinopsis cinerea CC1G_06273 N 0.704
Cucsa.364800 Cucumis sativus Cucsa.364800 N 0.761
Glyma09g17080.1 Glycine max Glyma09g17080.1 N 0.775
Glyma02g29190.1 Glycine max Glyma02g29190.1 N 0.775
MDP0000340057 Malus x domestica MDP0000340057 N 0.775
Medtr1g137330 Medicago truncatula Medtr1g137330 N 0.775
Medtr8g129780 Medicago truncatula Medtr8g129780 N 0.803
mgf009918m Mimulus guttatus mgf009918m N 0.732
BGIOSIBCE027854 Oryza indica BGIOSIBCE027854 N 0.761
gw1.198.122.1 Physcomitrella patens gw1.198.122.1 N 0.732
B9HW06_POPTR Populus trichocarpa POPTR_0010s24120 N 0.761
ppa025985m Prunus persica ppa025985m N 0.775
29428.m000321 Ricinus communis 29428.m000321 N 0.789
Sb03g045720 Sorghum bicolor Sb03g045720 N 0.887
GSVIVG00021851001 Vitis vinifera GSVIVG00021851001 N 0.803
GRMZM2G056350 Zea mays GRMZM2G056350 N 0.859