estExt_fgenesh1_pm.C_10518 (Schizophyllum commune)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pm.C_10518 T50690_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pm.C_10518 RRM 52 121

Links

Other RRM family RBPs
Other Schizophyllum commune RBPs

47 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.4.1867.1 Agaricus bisporus e_gw1.4.1867.1 N 0.859
23087 Aureococcus anophagefferens 23087 N 0.757
GP3.065690 Batrachochytrium dendrobatidis GP3.065690 N 0.746
BC1G_07056 Botrytis cinerea BC1G_07056 N 0.732
CHGG_08656 Chaetomium globosum CHGG_08656 N 0.700
CIMG_07119 Coccidioides immitis CIMG_07119 N 0.704
CPSG_01188 Coccidioides posadasii CPSG_01188 N 0.704
GLRG_10164 Colletotrichum graminicola GLRG_10164 N 0.718
CC1G_14585 Coprinopsis cinerea CC1G_14585 N 0.930
e_gw1.7.1421.1 Cryphonectria parasitica e_gw1.7.1421.1 N 0.718
CNBG_5499 Cryptococcus neoformans CNBG_5499 N 0.704
FGSG_10271 Fusarium graminearum FGSG_10271 N 0.718
FOXG_05189 Fusarium oxysporum FOXG_05189 N 0.718
FVEG_02944 Fusarium verticillioides FVEG_02944 N 0.718
e_gw1.4.778.1 Heterobasidion annosum e_gw1.4.778.1 N 0.843
gww1.2.642.1 Laccaria bicolor gww1.2.642.1 N 0.873
MGG_07252 Magnaporthe oryzae MGG_07252 N 0.704
EDP44971.1 Malassezia globosa EDP44971.1 N 0.732
MCYG_08495 Microsporum canis MCYG_08495 N 0.704
MGYG_08646 Microsporum gypseum MGYG_08646 N 0.718
EEB97344.1 Moniliophthora perniciosa EEB97344.1 N 0.716
estExt_Genewise1.C_11041 Mucor circinelloides estExt_Genewise1.C_11041 N 0.732
estExt_fgenesh1_kg.C_50066 Myceliophthora thermophila estExt_fgenesh1_kg.C_50066 N 0.700
e_gw1.5.977.1 Nectria haematococca e_gw1.5.977.1 N 0.718
NCU03946 Neurospora crassa NCU03946 N 0.718
estExt_fgenesh3_kg.C_60298 Neurospora discreta estExt_fgenesh3_kg.C_60298 N 0.718
estExt_fgenesh2_kg.C_20042 Neurospora tetrasperma estExt_fgenesh2_kg.C_20042 N 0.718
PMAA_025390 Penicillium marneffei PMAA_025390 N 0.704
e_gwh2.2.847.1 Phanerochaete chrysosporium e_gwh2.2.847.1 I 0.814
e_gw1.29.77.1 Phycomyces blakesleeanus e_gw1.29.77.1 I 0.761
e_gw1.4.2157.1 Pleurotus ostreatus e_gw1.4.2157.1 N 0.901
estExt_fgenesh3_pg.C_140127 Postia placenta estExt_fgenesh3_pg.C_140127 N 0.871
RO3G_09831 Rhizopus oryzae RO3G_09831 N 0.789
SS1G_03706 Sclerotinia sclerotiorum SS1G_03706 N 0.732
estExt_fgenesh2_pm.C_40328 Serpula lacrymans estExt_fgenesh2_pm.C_40328 N 0.857
SPPG_00782 Spizellomyces punctatus SPPG_00782 N 0.775
XP_799120.1 Strongylocentrotus purpuratus XP_799120.1 I 0.700
estExt_fgenesh2_kg.C_50198 Thielavia terrestris estExt_fgenesh2_kg.C_50198 N 0.714
estExt_Genewise1Plus.C_40474 Tremella mesenterica estExt_Genewise1Plus.C_40474 N 0.746
estExt_fgenesh1_pm.C_10632 Trichoderma atroviride estExt_fgenesh1_pm.C_10632 N 0.704
e_gw1.4.511.1 Trichoderma reesei e_gw1.4.511.1 N 0.704
gw1.9.853.1 Trichoderma virens gw1.9.853.1 N 0.704
TERG_02884 Trichophyton rubrum TERG_02884 N 0.718
TESG_01534 Trichophyton tonsurans TESG_01534 N 0.718
UM02401 Ustilago maydis UM02401 N 0.761
VDBG_00465 Verticillium albo atrum VDBG_00465 N 0.718
VDAG_00074 Verticillium dahliae VDAG_00074 N 0.718