CC1G_14585 (Coprinopsis cinerea)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CC1G_14585 T28574_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CC1G_14585T0 RRM 79 148

Links

Other RRM family RBPs
Other Coprinopsis cinerea RBPs

63 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh1_pm.C_10518 Schizophyllum commune estExt_fgenesh1_pm.C_10518 N 0.930
e_gw1.4.2157.1 Pleurotus ostreatus e_gw1.4.2157.1 N 0.914
gww1.2.642.1 Laccaria bicolor gww1.2.642.1 N 0.886
estExt_fgenesh3_pg.C_140127 Postia placenta estExt_fgenesh3_pg.C_140127 N 0.873
e_gw1.4.1867.1 Agaricus bisporus e_gw1.4.1867.1 N 0.857
estExt_fgenesh2_pm.C_40328 Serpula lacrymans estExt_fgenesh2_pm.C_40328 N 0.831
e_gw1.4.778.1 Heterobasidion annosum e_gw1.4.778.1 N 0.817
RO3G_09831 Rhizopus oryzae RO3G_09831 N 0.814
e_gw1.29.77.1 Phycomyces blakesleeanus e_gw1.29.77.1 I 0.800
e_gwh2.2.847.1 Phanerochaete chrysosporium e_gwh2.2.847.1 I 0.789
SPPG_00782 Spizellomyces punctatus SPPG_00782 N 0.771
estExt_Genewise1Plus.C_40474 Tremella mesenterica estExt_Genewise1Plus.C_40474 N 0.771
estExt_Genewise1.C_11041 Mucor circinelloides estExt_Genewise1.C_11041 N 0.771
23087 Aureococcus anophagefferens 23087 N 0.761
EDP44971.1 Malassezia globosa EDP44971.1 N 0.757
UM02401 Ustilago maydis UM02401 N 0.757
SS1G_03706 Sclerotinia sclerotiorum SS1G_03706 N 0.743
PMAA_025390 Penicillium marneffei PMAA_025390 N 0.743
CPSG_01188 Coccidioides posadasii CPSG_01188 N 0.743
MCYG_08495 Microsporum canis MCYG_08495 N 0.743
GP3.065690 Batrachochytrium dendrobatidis GP3.065690 N 0.743
BC1G_07056 Botrytis cinerea BC1G_07056 N 0.743
CIMG_07119 Coccidioides immitis CIMG_07119 N 0.743
estExt_fgenesh3_kg.C_60298 Neurospora discreta estExt_fgenesh3_kg.C_60298 N 0.729
NCU03946 Neurospora crassa NCU03946 N 0.729
estExt_fgenesh2_kg.C_20042 Neurospora tetrasperma estExt_fgenesh2_kg.C_20042 N 0.729
e_gw1.7.1421.1 Cryphonectria parasitica e_gw1.7.1421.1 N 0.729
e_gw1.5.977.1 Nectria haematococca e_gw1.5.977.1 N 0.729
AFUA_1G09490 Aspergillus fumigatus CADAFUAG00007045 N 0.729
PABG_00587 Paracoccidioides brasiliensis PABG_00587 N 0.729
GSTUMT00011743001 Tuber melanosporum GSTUMT00011743001 N 0.729
fgenesh1_pm.00083_#_765 Aspergillus carbonarius fgenesh1_pm.00083_#_765 N 0.729
MGYG_08646 Microsporum gypseum MGYG_08646 N 0.729
GLRG_10164 Colletotrichum graminicola GLRG_10164 N 0.729
CNBG_5499 Cryptococcus neoformans CNBG_5499 N 0.729
BDBG_02376 Blastomyces dermatitidis BDBG_02376 N 0.729
NFIA_016120 Neosartorya fischeri CADNFIAG00000670 N 0.729
TERG_02884 Trichophyton rubrum TERG_02884 N 0.729
ACLA_026010 Aspergillus clavatus CADACLAG00002760 N 0.729
ANIA_01340 Aspergillus nidulans CADANIAG00001272 N 0.729
TESG_01534 Trichophyton tonsurans TESG_01534 N 0.729
VDBG_00465 Verticillium albo atrum VDBG_00465 N 0.729
UREG_05781 Uncinocarpus reesii UREG_05781 N 0.729
VDAG_00074 Verticillium dahliae VDAG_00074 N 0.729
AB03725.1 Alternaria brassicicola AB03725.1 N 0.714
Pc16g02770 Penicillium chrysogenum Pc16g02770 N 0.714
PredSwiss_CON654.3 Pneumocystis carinii PredSwiss_CON654.3 I 0.714
e_gw1.4.511.1 Trichoderma reesei e_gw1.4.511.1 N 0.714
EAT87520.1 Phaeosphaeria nodorum EAT87520.1 N 0.714
An08g01040 Aspergillus niger CADANGAG00006423 N 0.714
SNOG_05129 Stagonospora nodorum SNOG_05129 N 0.714
MGG_07252 Magnaporthe oryzae MGG_07252 N 0.714
estExt_fgenesh1_pm.C_10632 Trichoderma atroviride estExt_fgenesh1_pm.C_10632 N 0.714
AO090012000924 Aspergillus oryzae CADAORAG00006445 N 0.714
fgenesh1_pm.C_scaffold_6000038 Sporobolomyces roseus fgenesh1_pm.C_scaffold_6000038 N 0.714
gw1.9.853.1 Trichoderma virens gw1.9.853.1 N 0.714
estExt_Genewise1.C_100240 Cochliobolus heterostrophus C5 estExt_Genewise1.C_100240 N 0.714
estExt_fgenesh2_kg.C_50198 Thielavia terrestris estExt_fgenesh2_kg.C_50198 N 0.704
FGSG_10271 Fusarium graminearum FGSG_10271 N 0.700
FOXG_05189 Fusarium oxysporum FOXG_05189 N 0.700
PTRG_03828 Pyrenophora tritici repentis PTRG_03828 N 0.700
estExt_Genewise1Plus.C_chr_120039 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_120039 N 0.700
FVEG_02944 Fusarium verticillioides FVEG_02944 N 0.700