estExt_fgenesh2_kg.C_20042 (Neurospora tetrasperma)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh2_kg.C_20042 T50743_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_kg.C_20042 RRM 88 157

Links

Other RRM family RBPs
Other Neurospora tetrasperma RBPs

62 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GLRG_10164 Colletotrichum graminicola GLRG_10164 N 1.000
VDAG_00074 Verticillium dahliae VDAG_00074 N 1.000
VDBG_00465 Verticillium albo atrum VDBG_00465 N 1.000
NCU03946 Neurospora crassa NCU03946 N 1.000
estExt_fgenesh3_kg.C_60298 Neurospora discreta estExt_fgenesh3_kg.C_60298 N 1.000
e_gw1.5.977.1 Nectria haematococca e_gw1.5.977.1 N 1.000
MGG_07252 Magnaporthe oryzae MGG_07252 N 0.986
gw1.9.853.1 Trichoderma virens gw1.9.853.1 N 0.986
estExt_fgenesh1_pm.C_10632 Trichoderma atroviride estExt_fgenesh1_pm.C_10632 N 0.986
e_gw1.4.511.1 Trichoderma reesei e_gw1.4.511.1 N 0.986
FOXG_05189 Fusarium oxysporum FOXG_05189 N 0.971
FVEG_02944 Fusarium verticillioides FVEG_02944 N 0.971
e_gw1.7.1421.1 Cryphonectria parasitica e_gw1.7.1421.1 N 0.971
SS1G_03706 Sclerotinia sclerotiorum SS1G_03706 N 0.943
ACLA_026010 Aspergillus clavatus CADACLAG00002760 N 0.943
PABG_00587 Paracoccidioides brasiliensis PABG_00587 N 0.943
BC1G_07056 Botrytis cinerea BC1G_07056 N 0.943
fgenesh1_pm.00083_#_765 Aspergillus carbonarius fgenesh1_pm.00083_#_765 N 0.943
ANIA_01340 Aspergillus nidulans CADANIAG00001272 N 0.943
FGSG_10271 Fusarium graminearum FGSG_10271 N 0.943
BDBG_02376 Blastomyces dermatitidis BDBG_02376 N 0.943
AFUA_1G09490 Aspergillus fumigatus CADAFUAG00007045 N 0.943
NFIA_016120 Neosartorya fischeri CADNFIAG00000670 N 0.943
AO090012000924 Aspergillus oryzae CADAORAG00006445 N 0.929
MGYG_08646 Microsporum gypseum MGYG_08646 N 0.929
Pc16g02770 Penicillium chrysogenum Pc16g02770 N 0.929
TESG_01534 Trichophyton tonsurans TESG_01534 N 0.929
An08g01040 Aspergillus niger CADANGAG00006423 N 0.929
PMAA_025390 Penicillium marneffei PMAA_025390 N 0.929
TERG_02884 Trichophyton rubrum TERG_02884 N 0.929
GSTUMT00011743001 Tuber melanosporum GSTUMT00011743001 N 0.929
UREG_05781 Uncinocarpus reesii UREG_05781 N 0.929
MCYG_08495 Microsporum canis MCYG_08495 N 0.914
CPSG_01188 Coccidioides posadasii CPSG_01188 N 0.914
CIMG_07119 Coccidioides immitis CIMG_07119 N 0.914
estExt_fgenesh1_kg.C_50066 Myceliophthora thermophila estExt_fgenesh1_kg.C_50066 N 0.901
CHGG_08656 Chaetomium globosum CHGG_08656 N 0.901
estExt_fgenesh2_kg.C_50198 Thielavia terrestris estExt_fgenesh2_kg.C_50198 N 0.887
EAT87520.1 Phaeosphaeria nodorum EAT87520.1 N 0.843
estExt_Genewise1Plus.C_chr_120039 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_120039 N 0.843
SNOG_05129 Stagonospora nodorum SNOG_05129 N 0.843
Pa_4_2600 Podospora anserina Pa_4_2600 N 0.831
PTRG_03828 Pyrenophora tritici repentis PTRG_03828 N 0.814
AB03725.1 Alternaria brassicicola AB03725.1 N 0.814
estExt_Genewise1.C_100240 Cochliobolus heterostrophus C5 estExt_Genewise1.C_100240 N 0.814
SPPG_00782 Spizellomyces punctatus SPPG_00782 N 0.786
UM02401 Ustilago maydis UM02401 N 0.786
CNBG_5499 Cryptococcus neoformans CNBG_5499 N 0.743
fgenesh1_pm.C_scaffold_6000038 Sporobolomyces roseus fgenesh1_pm.C_scaffold_6000038 N 0.729
estExt_Genewise1Plus.C_40474 Tremella mesenterica estExt_Genewise1Plus.C_40474 N 0.729
EDP44971.1 Malassezia globosa EDP44971.1 N 0.729
CC1G_14585 Coprinopsis cinerea CC1G_14585 N 0.729
GP3.065690 Batrachochytrium dendrobatidis GP3.065690 N 0.729
estExt_fgenesh1_pm.C_10518 Schizophyllum commune estExt_fgenesh1_pm.C_10518 N 0.718
estExt_Genewise1.C_11041 Mucor circinelloides estExt_Genewise1.C_11041 N 0.714
e_gw1.4.2157.1 Pleurotus ostreatus e_gw1.4.2157.1 N 0.714
RO3G_09831 Rhizopus oryzae RO3G_09831 N 0.714
PredSwiss_CON654.3 Pneumocystis carinii PredSwiss_CON654.3 I 0.714
estExt_fgenesh2_pm.C_40328 Serpula lacrymans estExt_fgenesh2_pm.C_40328 N 0.704
gww1.2.642.1 Laccaria bicolor gww1.2.642.1 N 0.700
e_gw1.4.1867.1 Agaricus bisporus e_gw1.4.1867.1 N 0.700
gw1.7.208.1 Melampsora laricis populina gw1.7.208.1 N 0.700