estExt_fgenesh1_pg.C_70071 (Cryphonectria parasitica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pg.C_70071 T56228_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_70071 RRM 8 77

Links

Other RRM family RBPs
Other Cryphonectria parasitica RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.00772_#_6 Aspergillus carbonarius fgenesh1_pg.00772_#_6 N 0.929
ACLA_079420 Aspergillus clavatus CADACLAG00008191 N 0.929
AFUA_2G07410 Aspergillus fumigatus CADAFUAG00004837 N 0.929
ANIA_05802 Aspergillus nidulans CADANIAG00007246 N 0.929
BDBG_04820 Blastomyces dermatitidis BDBG_04820 N 0.929
BC1G_10655 Botrytis cinerea BC1G_10655 N 0.900
CHGG_08634 Chaetomium globosum CHGG_08634 N 0.929
CIMG_04239 Coccidioides immitis CIMG_04239 N 0.886
CPSG_03018 Coccidioides posadasii CPSG_03018 N 0.886
estExt_fgenesh1_pg.C_10183 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_10183 N 0.944
GLRG_09205 Colletotrichum graminicola GLRG_09205 N 0.957
FGSG_09864 Fusarium graminearum FGSG_09864 N 0.901
FOXG_05563 Fusarium oxysporum FOXG_05563 N 0.901
FVEG_02576 Fusarium verticillioides FVEG_02576 N 0.901
MGG_04482 Magnaporthe oryzae MGG_04482 N 0.873
MCYG_01367 Microsporum canis MCYG_01367 N 0.914
MGYG_01912 Microsporum gypseum MGYG_01912 N 0.900
estExt_fgenesh1_kg.C_50055 Myceliophthora thermophila estExt_fgenesh1_kg.C_50055 N 0.971
estExt_fgenesh1_pm.C_120037 Mycosphaerella fijiensis estExt_fgenesh1_pm.C_120037 N 0.914
estExt_Genewise1.C_chr_61428 Mycosphaerella graminicola estExt_Genewise1.C_chr_61428 N 0.943
estExt_fgenesh1_kg.C_sca_5_chr5_3_00001 Nectria haematococca estExt_fgenesh1_kg.C_sca_5_chr5_3_00001 N 0.901
NFIA_083160 Neosartorya fischeri CADNFIAG00008574 N 0.929
NCU03990 Neurospora crassa NCU03990 N 0.957
estExt_fgenesh3_kg.C_60269 Neurospora discreta estExt_fgenesh3_kg.C_60269 N 0.957
estExt_fgenesh2_kg.C_20064 Neurospora tetrasperma estExt_fgenesh2_kg.C_20064 N 0.957
Pc13g05520 Penicillium chrysogenum Pc13g05520 N 0.914
PMAA_069740 Penicillium marneffei PMAA_069740 N 0.943
EAT82749.2 Phaeosphaeria nodorum EAT82749.2 N 0.957
Pa_4_2370 Podospora anserina Pa_4_2370 N 0.957
PTRG_11366 Pyrenophora tritici repentis PTRG_11366 N 0.957
SJAG_04071 Schizosaccharomyces japonicus SJAG_04071 N 0.704
SS1G_10587 Sclerotinia sclerotiorum SS1G_10587 N 0.900
estExt_Genewise1.C_52035 Thielavia terrestris estExt_Genewise1.C_52035 N 0.971
estExt_Genewise1Plus.C_14275 Trichoderma atroviride estExt_Genewise1Plus.C_14275 N 0.915
estExt_fgenesh5_pg.C_30562 Trichoderma reesei estExt_fgenesh5_pg.C_30562 N 0.915
estExt_fgenesh1_pg.C_330003 Trichoderma virens estExt_fgenesh1_pg.C_330003 N 0.915
TEQG_07864 Trichophyton equinum TEQG_07864 N 0.900
TERG_04645 Trichophyton rubrum TERG_04645 N 0.900
TESG_06009 Trichophyton tonsurans TESG_06009 N 0.900
GSTUMT00005522001 Tuber melanosporum GSTUMT00005522001 N 0.845
VDAG_06680 Verticillium dahliae VDAG_06680 N 0.943