fgenesh1_pg.00772_#_6 (Aspergillus carbonarius)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pg.00772_#_6 T56533_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.00772_#_6 RRM 8 77

Links

Other RRM family RBPs
Other Aspergillus carbonarius RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ACLA_079420 Aspergillus clavatus CADACLAG00008191 N 1.000
NFIA_083160 Neosartorya fischeri CADNFIAG00008574 N 1.000
ANIA_05802 Aspergillus nidulans CADANIAG00007246 N 1.000
AFUA_2G07410 Aspergillus fumigatus CADAFUAG00004837 N 1.000
estExt_Genewise1.C_chr_61428 Mycosphaerella graminicola estExt_Genewise1.C_chr_61428 N 0.986
Pc13g05520 Penicillium chrysogenum Pc13g05520 N 0.986
PMAA_069740 Penicillium marneffei PMAA_069740 N 0.986
EAT82749.2 Phaeosphaeria nodorum EAT82749.2 N 0.971
PTRG_11366 Pyrenophora tritici repentis PTRG_11366 N 0.971
BDBG_04820 Blastomyces dermatitidis BDBG_04820 N 0.971
estExt_fgenesh1_pg.C_10183 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_10183 N 0.958
MCYG_01367 Microsporum canis MCYG_01367 N 0.957
SS1G_10587 Sclerotinia sclerotiorum SS1G_10587 N 0.943
TEQG_07864 Trichophyton equinum TEQG_07864 N 0.943
estExt_fgenesh1_pm.C_120037 Mycosphaerella fijiensis estExt_fgenesh1_pm.C_120037 N 0.943
TESG_06009 Trichophyton tonsurans TESG_06009 N 0.943
TERG_04645 Trichophyton rubrum TERG_04645 N 0.943
BC1G_10655 Botrytis cinerea BC1G_10655 N 0.943
MGYG_01912 Microsporum gypseum MGYG_01912 N 0.943
estExt_Genewise1.C_52035 Thielavia terrestris estExt_Genewise1.C_52035 N 0.929
estExt_fgenesh1_kg.C_50055 Myceliophthora thermophila estExt_fgenesh1_kg.C_50055 N 0.929
CIMG_04239 Coccidioides immitis CIMG_04239 N 0.929
CPSG_03018 Coccidioides posadasii CPSG_03018 N 0.929
estExt_fgenesh1_pg.C_70071 Cryphonectria parasitica estExt_fgenesh1_pg.C_70071 N 0.929
estExt_fgenesh2_kg.C_20064 Neurospora tetrasperma estExt_fgenesh2_kg.C_20064 N 0.914
estExt_fgenesh3_kg.C_60269 Neurospora discreta estExt_fgenesh3_kg.C_60269 N 0.914
GLRG_09205 Colletotrichum graminicola GLRG_09205 N 0.914
Pa_4_2370 Podospora anserina Pa_4_2370 N 0.914
NCU03990 Neurospora crassa NCU03990 N 0.914
VDAG_06680 Verticillium dahliae VDAG_06680 N 0.900
estExt_fgenesh5_pg.C_30562 Trichoderma reesei estExt_fgenesh5_pg.C_30562 N 0.887
estExt_fgenesh1_pg.C_330003 Trichoderma virens estExt_fgenesh1_pg.C_330003 N 0.887
estExt_Genewise1Plus.C_14275 Trichoderma atroviride estExt_Genewise1Plus.C_14275 N 0.887
CHGG_08634 Chaetomium globosum CHGG_08634 N 0.886
estExt_fgenesh1_kg.C_sca_5_chr5_3_00001 Nectria haematococca estExt_fgenesh1_kg.C_sca_5_chr5_3_00001 N 0.873
FGSG_09864 Fusarium graminearum FGSG_09864 N 0.873
FVEG_02576 Fusarium verticillioides FVEG_02576 N 0.873
FOXG_05563 Fusarium oxysporum FOXG_05563 N 0.873
GSTUMT00005522001 Tuber melanosporum GSTUMT00005522001 N 0.859
MGG_04482 Magnaporthe oryzae MGG_04482 N 0.831