estExt_Genewise1.C_chr_61428 (Mycosphaerella graminicola)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1.C_chr_61428 T51320_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_chr_61428 RRM 9 78

Links

Other RRM family RBPs
Other Mycosphaerella graminicola RBPs

40 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PMAA_069740 Penicillium marneffei PMAA_069740 N 1.000
BDBG_04820 Blastomyces dermatitidis BDBG_04820 N 0.986
AFUA_2G07410 Aspergillus fumigatus CADAFUAG00004837 N 0.986
ACLA_079420 Aspergillus clavatus CADACLAG00008191 N 0.986
PTRG_11366 Pyrenophora tritici repentis PTRG_11366 N 0.986
ANIA_05802 Aspergillus nidulans CADANIAG00007246 N 0.986
EAT82749.2 Phaeosphaeria nodorum EAT82749.2 N 0.986
NFIA_083160 Neosartorya fischeri CADNFIAG00008574 N 0.986
fgenesh1_pg.00772_#_6 Aspergillus carbonarius fgenesh1_pg.00772_#_6 N 0.986
estExt_fgenesh1_pg.C_10183 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_10183 N 0.972
MCYG_01367 Microsporum canis MCYG_01367 N 0.971
Pc13g05520 Penicillium chrysogenum Pc13g05520 N 0.971
SS1G_10587 Sclerotinia sclerotiorum SS1G_10587 N 0.957
TEQG_07864 Trichophyton equinum TEQG_07864 N 0.957
estExt_fgenesh1_pm.C_120037 Mycosphaerella fijiensis estExt_fgenesh1_pm.C_120037 N 0.957
TESG_06009 Trichophyton tonsurans TESG_06009 N 0.957
TERG_04645 Trichophyton rubrum TERG_04645 N 0.957
MGYG_01912 Microsporum gypseum MGYG_01912 N 0.957
BC1G_10655 Botrytis cinerea BC1G_10655 N 0.957
estExt_fgenesh1_pg.C_70071 Cryphonectria parasitica estExt_fgenesh1_pg.C_70071 N 0.943
estExt_fgenesh1_kg.C_50055 Myceliophthora thermophila estExt_fgenesh1_kg.C_50055 N 0.943
CIMG_04239 Coccidioides immitis CIMG_04239 N 0.943
estExt_Genewise1.C_52035 Thielavia terrestris estExt_Genewise1.C_52035 N 0.943
CPSG_03018 Coccidioides posadasii CPSG_03018 N 0.943
estExt_fgenesh2_kg.C_20064 Neurospora tetrasperma estExt_fgenesh2_kg.C_20064 N 0.929
estExt_fgenesh3_kg.C_60269 Neurospora discreta estExt_fgenesh3_kg.C_60269 N 0.929
NCU03990 Neurospora crassa NCU03990 N 0.929
Pa_4_2370 Podospora anserina Pa_4_2370 N 0.929
GLRG_09205 Colletotrichum graminicola GLRG_09205 N 0.929
VDAG_06680 Verticillium dahliae VDAG_06680 N 0.914
CHGG_08634 Chaetomium globosum CHGG_08634 N 0.900
estExt_fgenesh1_pg.C_330003 Trichoderma virens estExt_fgenesh1_pg.C_330003 N 0.887
estExt_fgenesh5_pg.C_30562 Trichoderma reesei estExt_fgenesh5_pg.C_30562 N 0.887
estExt_Genewise1Plus.C_14275 Trichoderma atroviride estExt_Genewise1Plus.C_14275 N 0.887
FVEG_02576 Fusarium verticillioides FVEG_02576 N 0.873
FOXG_05563 Fusarium oxysporum FOXG_05563 N 0.873
GSTUMT00005522001 Tuber melanosporum GSTUMT00005522001 N 0.873
FGSG_09864 Fusarium graminearum FGSG_09864 N 0.873
estExt_fgenesh1_kg.C_sca_5_chr5_3_00001 Nectria haematococca estExt_fgenesh1_kg.C_sca_5_chr5_3_00001 N 0.873
MGG_04482 Magnaporthe oryzae MGG_04482 N 0.845