estExt_Genewise1Plus.C_14275 (Trichoderma atroviride)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1Plus.C_14275 T51381_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_14275 RRM 8 77

Links

Other RRM family RBPs
Other Trichoderma atroviride RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh1_pg.C_330003 Trichoderma virens estExt_fgenesh1_pg.C_330003 N 1.000
estExt_fgenesh5_pg.C_30562 Trichoderma reesei estExt_fgenesh5_pg.C_30562 N 1.000
FGSG_09864 Fusarium graminearum FGSG_09864 N 0.986
estExt_fgenesh1_kg.C_sca_5_chr5_3_00001 Nectria haematococca estExt_fgenesh1_kg.C_sca_5_chr5_3_00001 N 0.986
FOXG_05563 Fusarium oxysporum FOXG_05563 N 0.986
FVEG_02576 Fusarium verticillioides FVEG_02576 N 0.986
MGG_04482 Magnaporthe oryzae MGG_04482 N 0.929
estExt_fgenesh1_pg.C_70071 Cryphonectria parasitica estExt_fgenesh1_pg.C_70071 N 0.915
estExt_fgenesh1_kg.C_50055 Myceliophthora thermophila estExt_fgenesh1_kg.C_50055 N 0.915
estExt_Genewise1.C_52035 Thielavia terrestris estExt_Genewise1.C_52035 N 0.915
EAT82749.2 Phaeosphaeria nodorum EAT82749.2 N 0.901
estExt_fgenesh1_pg.C_10183 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_10183 N 0.901
estExt_fgenesh3_kg.C_60269 Neurospora discreta estExt_fgenesh3_kg.C_60269 N 0.901
estExt_fgenesh2_kg.C_20064 Neurospora tetrasperma estExt_fgenesh2_kg.C_20064 N 0.901
NCU03990 Neurospora crassa NCU03990 N 0.901
PTRG_11366 Pyrenophora tritici repentis PTRG_11366 N 0.901
GLRG_09205 Colletotrichum graminicola GLRG_09205 N 0.901
Pa_4_2370 Podospora anserina Pa_4_2370 N 0.901
GSTUMT00005522001 Tuber melanosporum GSTUMT00005522001 N 0.900
ANIA_05802 Aspergillus nidulans CADANIAG00007246 N 0.887
ACLA_079420 Aspergillus clavatus CADACLAG00008191 N 0.887
NFIA_083160 Neosartorya fischeri CADNFIAG00008574 N 0.887
PMAA_069740 Penicillium marneffei PMAA_069740 N 0.887
VDAG_06680 Verticillium dahliae VDAG_06680 N 0.887
fgenesh1_pg.00772_#_6 Aspergillus carbonarius fgenesh1_pg.00772_#_6 N 0.887
AFUA_2G07410 Aspergillus fumigatus CADAFUAG00004837 N 0.887
estExt_Genewise1.C_chr_61428 Mycosphaerella graminicola estExt_Genewise1.C_chr_61428 N 0.887
Pc13g05520 Penicillium chrysogenum Pc13g05520 N 0.873
CHGG_08634 Chaetomium globosum CHGG_08634 N 0.873
BDBG_04820 Blastomyces dermatitidis BDBG_04820 N 0.873
MCYG_01367 Microsporum canis MCYG_01367 N 0.859
estExt_fgenesh1_pm.C_120037 Mycosphaerella fijiensis estExt_fgenesh1_pm.C_120037 N 0.859
TERG_04645 Trichophyton rubrum TERG_04645 N 0.845
MGYG_01912 Microsporum gypseum MGYG_01912 N 0.845
SS1G_10587 Sclerotinia sclerotiorum SS1G_10587 N 0.845
TEQG_07864 Trichophyton equinum TEQG_07864 N 0.845
BC1G_10655 Botrytis cinerea BC1G_10655 N 0.845
TESG_06009 Trichophyton tonsurans TESG_06009 N 0.845
CPSG_03018 Coccidioides posadasii CPSG_03018 N 0.831
CIMG_04239 Coccidioides immitis CIMG_04239 N 0.831
SJAG_04071 Schizosaccharomyces japonicus SJAG_04071 N 0.704