CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MGG_04482
(
Magnaporthe oryzae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MGG_04482
T29758_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MGG_04482T0
RRM
8
77
LYVTGFSHGTRARDLAYEFERYGRLVRCDIPAPRSASSRLFAFVEYEDRRDADEAYHDMHNKRLGRDDIL
Links
Other
RRM
family RBPs
Other
Magnaporthe oryzae
RBPs
40 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FGSG_09864
Fusarium graminearum
FGSG_09864
N
0.943
estExt_fgenesh1_kg.C_sca_5_chr5_3_00001
Nectria haematococca
estExt_fgenesh1_kg.C_sca_5_chr5_3_00001
N
0.943
FOXG_05563
Fusarium oxysporum
FOXG_05563
N
0.943
FVEG_02576
Fusarium verticillioides
FVEG_02576
N
0.943
estExt_fgenesh1_pg.C_330003
Trichoderma virens
estExt_fgenesh1_pg.C_330003
N
0.929
estExt_Genewise1Plus.C_14275
Trichoderma atroviride
estExt_Genewise1Plus.C_14275
N
0.929
estExt_fgenesh5_pg.C_30562
Trichoderma reesei
estExt_fgenesh5_pg.C_30562
N
0.929
Pa_4_2370
Podospora anserina
Pa_4_2370
N
0.915
estExt_fgenesh3_kg.C_60269
Neurospora discreta
estExt_fgenesh3_kg.C_60269
N
0.915
estExt_fgenesh2_kg.C_20064
Neurospora tetrasperma
estExt_fgenesh2_kg.C_20064
N
0.915
NCU03990
Neurospora crassa
NCU03990
N
0.915
estExt_Genewise1.C_52035
Thielavia terrestris
estExt_Genewise1.C_52035
N
0.901
estExt_fgenesh1_kg.C_50055
Myceliophthora thermophila
estExt_fgenesh1_kg.C_50055
N
0.901
GLRG_09205
Colletotrichum graminicola
GLRG_09205
N
0.887
CHGG_08634
Chaetomium globosum
CHGG_08634
N
0.873
estExt_fgenesh1_pg.C_70071
Cryphonectria parasitica
estExt_fgenesh1_pg.C_70071
N
0.873
PTRG_11366
Pyrenophora tritici repentis
PTRG_11366
N
0.859
EAT82749.2
Phaeosphaeria nodorum
EAT82749.2
N
0.859
VDAG_06680
Verticillium dahliae
VDAG_06680
N
0.859
estExt_fgenesh1_pg.C_10183
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_10183
N
0.859
GSTUMT00005522001
Tuber melanosporum
GSTUMT00005522001
N
0.857
PMAA_069740
Penicillium marneffei
PMAA_069740
N
0.845
estExt_Genewise1.C_chr_61428
Mycosphaerella graminicola
estExt_Genewise1.C_chr_61428
N
0.845
MCYG_01367
Microsporum canis
MCYG_01367
N
0.845
NFIA_083160
Neosartorya fischeri
CADNFIAG00008574
N
0.831
fgenesh1_pg.00772_#_6
Aspergillus carbonarius
fgenesh1_pg.00772_#_6
N
0.831
ACLA_079420
Aspergillus clavatus
CADACLAG00008191
N
0.831
AFUA_2G07410
Aspergillus fumigatus
CADAFUAG00004837
N
0.831
BDBG_04820
Blastomyces dermatitidis
BDBG_04820
N
0.831
ANIA_05802
Aspergillus nidulans
CADANIAG00007246
N
0.831
TEQG_07864
Trichophyton equinum
TEQG_07864
N
0.817
Pc13g05520
Penicillium chrysogenum
Pc13g05520
N
0.817
TESG_06009
Trichophyton tonsurans
TESG_06009
N
0.817
MGYG_01912
Microsporum gypseum
MGYG_01912
N
0.817
TERG_04645
Trichophyton rubrum
TERG_04645
N
0.817
estExt_fgenesh1_pm.C_120037
Mycosphaerella fijiensis
estExt_fgenesh1_pm.C_120037
N
0.817
CIMG_04239
Coccidioides immitis
CIMG_04239
N
0.803
CPSG_03018
Coccidioides posadasii
CPSG_03018
N
0.803
BC1G_10655
Botrytis cinerea
BC1G_10655
N
0.803
SS1G_10587
Sclerotinia sclerotiorum
SS1G_10587
N
0.803