CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TEQG_07864
(
Trichophyton equinum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
TEQG_07864
T31064_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TEQG_07864T0
RRM
9
77
LYVTGFGHGTRARELAYEFERYGRLVRCDIPAPRTASSRLFAFVEYESRRDADDAYHEMHNKRIGRDDV
Links
Other
RRM
family RBPs
Other
Trichophyton equinum
RBPs
40 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MGYG_01912
Microsporum gypseum
MGYG_01912
N
1.000
TERG_04645
Trichophyton rubrum
TERG_04645
N
1.000
TESG_06009
Trichophyton tonsurans
TESG_06009
N
1.000
CIMG_04239
Coccidioides immitis
CIMG_04239
N
0.986
CPSG_03018
Coccidioides posadasii
CPSG_03018
N
0.986
BDBG_04820
Blastomyces dermatitidis
BDBG_04820
N
0.971
MCYG_01367
Microsporum canis
MCYG_01367
N
0.971
estExt_Genewise1.C_chr_61428
Mycosphaerella graminicola
estExt_Genewise1.C_chr_61428
N
0.957
PMAA_069740
Penicillium marneffei
PMAA_069740
N
0.957
Pc13g05520
Penicillium chrysogenum
Pc13g05520
N
0.957
PTRG_11366
Pyrenophora tritici repentis
PTRG_11366
N
0.943
fgenesh1_pg.00772_#_6
Aspergillus carbonarius
fgenesh1_pg.00772_#_6
N
0.943
EAT82749.2
Phaeosphaeria nodorum
EAT82749.2
N
0.943
ANIA_05802
Aspergillus nidulans
CADANIAG00007246
N
0.943
NFIA_083160
Neosartorya fischeri
CADNFIAG00008574
N
0.943
AFUA_2G07410
Aspergillus fumigatus
CADAFUAG00004837
N
0.943
ACLA_079420
Aspergillus clavatus
CADACLAG00008191
N
0.943
estExt_fgenesh1_pg.C_10183
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_10183
N
0.930
VDAG_06680
Verticillium dahliae
VDAG_06680
N
0.928
estExt_fgenesh1_kg.C_50055
Myceliophthora thermophila
estExt_fgenesh1_kg.C_50055
N
0.914
SS1G_10587
Sclerotinia sclerotiorum
SS1G_10587
N
0.914
BC1G_10655
Botrytis cinerea
BC1G_10655
N
0.914
estExt_Genewise1.C_52035
Thielavia terrestris
estExt_Genewise1.C_52035
N
0.914
estExt_fgenesh1_pm.C_120037
Mycosphaerella fijiensis
estExt_fgenesh1_pm.C_120037
N
0.914
CHGG_08634
Chaetomium globosum
CHGG_08634
N
0.913
GLRG_09205
Colletotrichum graminicola
GLRG_09205
N
0.900
NCU03990
Neurospora crassa
NCU03990
N
0.900
estExt_fgenesh1_pg.C_70071
Cryphonectria parasitica
estExt_fgenesh1_pg.C_70071
N
0.900
Pa_4_2370
Podospora anserina
Pa_4_2370
N
0.900
estExt_fgenesh2_kg.C_20064
Neurospora tetrasperma
estExt_fgenesh2_kg.C_20064
N
0.900
estExt_fgenesh3_kg.C_60269
Neurospora discreta
estExt_fgenesh3_kg.C_60269
N
0.900
estExt_fgenesh5_pg.C_30562
Trichoderma reesei
estExt_fgenesh5_pg.C_30562
N
0.845
FVEG_02576
Fusarium verticillioides
FVEG_02576
N
0.845
estExt_Genewise1Plus.C_14275
Trichoderma atroviride
estExt_Genewise1Plus.C_14275
N
0.845
estExt_fgenesh1_pg.C_330003
Trichoderma virens
estExt_fgenesh1_pg.C_330003
N
0.845
estExt_fgenesh1_kg.C_sca_5_chr5_3_00001
Nectria haematococca
estExt_fgenesh1_kg.C_sca_5_chr5_3_00001
N
0.845
FOXG_05563
Fusarium oxysporum
FOXG_05563
N
0.845
FGSG_09864
Fusarium graminearum
FGSG_09864
N
0.845
GSTUMT00005522001
Tuber melanosporum
GSTUMT00005522001
N
0.831
MGG_04482
Magnaporthe oryzae
MGG_04482
N
0.817