CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PHUM299460
(
Pediculus humanus
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
PHUM299460
T60734_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PHUM299460-PA
S1
277
356
DPEVGKIYNGKIANIVPFGCFVQLENLRKRWEGLVHISQLRREGRITTVADVVSRGQKVKVKVLSVTGQKVSLSIKDVDQ
Links
Other
S1
family RBPs
Other
Pediculus humanus
RBPs
44 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL010318
Aedes aegypti
AAEL010318
I
0.000
Bm1_06880
Brugia malayi
Bm1_06880
I
0.000
Bm1_16080
Brugia malayi
Bm1_16080
I
0.000
CBN04295
Caenorhabditis brenneri
CBN04295
I
0.000
CBN18184
Caenorhabditis brenneri
CBN18184
N
0.000
CBG07431
Caenorhabditis briggsae
CBG07431
N
0.000
pab-1
Caenorhabditis elegans
Y106G6H.2
I
0.000
pab-2
Caenorhabditis elegans
F18H3.3
N
0.000
CJA17800
Caenorhabditis japonica
CJA17800
N
0.000
CJA16600
Caenorhabditis japonica
CJA16600
N
0.000
CRE22405
Caenorhabditis remanei
CRE22405
N
0.000
GF12652
Drosophila ananassae
FBgn0089688
I
0.000
GG21846
Drosophila erecta
FBgn0114024
I
0.000
GH21052
Drosophila grimshawi
FBgn0128514
I
0.000
GI18654
Drosophila mojavensis
FBgn0141393
I
0.000
GD11341
Drosophila simulans
FBgn0183090
I
0.000
GJ21671
Drosophila virilis
FBgn0208790
I
0.000
GK19652
Drosophila willistoni
FBgn0221650
I
0.000
GE11925
Drosophila yakuba
FBgn0229707
I
0.000
ISCW014211
Ixodes scapularis
ISCW014211
I
0.000
LOAG_01058
Loa loa
LOAG_01058
I
0.000
PHUM617090
Pediculus humanus
PHUM617090
I
0.000