CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ISCW002555
(
Ixodes scapularis
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
ISCW002555
T60691_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ISCW002555-PA
S1
166
241
DPVVGQIYNGKVTNIMQFGCFVQLEGLPRRWEGLVHISQLRREGRITNVGDVVARGQRVKVKVLSFTGQKTSLSMK
Links
Other
S1
family RBPs
Other
Ixodes scapularis
RBPs
56 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Dhx8
Mus musculus
ENSMUSG00000034931
N
0.816
DHX8
Oryctolagus cuniculus
ENSOCUG00000008014
N
0.816
DHX8
Ochotona princeps
ENSOPRG00000014865
N
0.816
DHX8
Macaca mulatta
ENSMMUG00000012071
N
0.816
DHX8
Myotis lucifugus
ENSMLUG00000000090
N
0.816
LOC771596
Gallus gallus
ENSGALG00000001186
N
0.816
LOC425433
Gallus gallus
ENSGALG00000008448
N
0.816
DHX8
Loxodonta africana
ENSLAFG00000022159
N
0.816
DHX8
Oryzias latipes
ENSORLG00000011951
N
0.816
ENSPPYG00000008357
Pongo pygmaeus
ENSPPYG00000008357
N
0.816
DHX8
Taeniopygia guttata
ENSTGUG00000002881
N
0.816
DHX8
Tarsius syrichta
ENSTSYG00000008782
N
0.816
DHX8
Vicugna pacos
ENSVPAG00000004605
N
0.816
DHX8
Sus scrofa
ENSSSCG00000017378
N
0.816
Dhx8
Rattus norvegicus
ENSRNOG00000020772
N
0.816
DHX8
Pan troglodytes
ENSPTRG00000009246
N
0.816
DHX8
Pteropus vampyrus
ENSPVAG00000014872
N
0.816
DHX8
Gasterosteus aculeatus
ENSGACG00000003750
N
0.816
DHX8
Monodelphis domestica
ENSMODG00000015181
N
0.816
Ame_R007841
Ailuropoda melanoleuca
Ame_R007841
N
0.816
Dhx8
Dipodomys ordii
ENSDORG00000013845
N
0.816
DHX8
Canis familiaris
ENSCAFG00000014556
N
0.816
DHX8
Danio rerio
ENSDARG00000054707
N
0.816
DHX8
Cavia porcellus
ENSCPOG00000000224
N
0.816
DHX8
Bos taurus
ENSBTAG00000008339
N
0.816
LOC100051804
Equus caballus
ENSECAG00000019601
N
0.816
DHX8
Felis catus
ENSFCAG00000009908
N
0.816
LOC100394123
Callithrix jacchus
ENSCJAG00000010659
N
0.816
DHX8
Anolis carolinensis
ENSACAG00000013509
N
0.816
DHX8
Homo sapiens
ENSG00000067596
N
0.816
DHX8
Takifugu rubripes
ENSTRUG00000002454
N
0.803
dhx8
Xenopus tropicalis
ENSXETG00000013672
N
0.803
DHX8
Gorilla gorilla
ENSGGOG00000000143
N
0.803
DHX8
Echinops telfairi
ENSETEG00000010986
N
0.803
ENSMLUG00000014389
Myotis lucifugus
ENSMLUG00000014389
N
0.803
DHX8
Tursiops truncatus
ENSTTRG00000016056
N
0.803
AAH73477
Xenopus laevis
AAH73477
N
0.789
DHX8
Dasypus novemcinctus
ENSDNOG00000013606
N
0.776
ENSGACG00000003736
Gasterosteus aculeatus
ENSGACG00000003736
N
0.776
amel4_ncbi_hmm2843
Apis mellifera
amel4_ncbi_hmm2843
N
0.750
PHUM299460
Pediculus humanus
PHUM299460
N
0.750
GJ21042
Drosophila virilis
FBgn0208176
N
0.737
DHX8
Sorex araneus
ENSSARG00000007300
N
0.737
GI21186
Drosophila mojavensis
FBgn0143917
N
0.724
GE13554
Drosophila yakuba
FBgn0231217
N
0.724
GL11247
Drosophila persimilis
FBgn0148856
N
0.724
GA20923-RA
Drosophila pseudoobscura
FBgn0080912
N
0.724
ENSTRUG00000004063
Takifugu rubripes
ENSTRUG00000004063
N
0.724
189215
Helobdella robusta
189215
N
0.724
GF12026
Drosophila ananassae
FBgn0089065
N
0.711
ENSTNIG00000002771
Tetraodon nigroviridis
ENSTNIG00000002771
N
0.711
GM21509
Drosophila sechellia
FBgn0176389
N
0.711
Aqu1.228495
Amphimedon queenslandica
Aqu1.228495
N
0.711
GH22675
Drosophila grimshawi
FBgn0130133
N
0.711
pea
Drosophila melanogaster
FBgn0086895
N
0.711
GG20423
Drosophila erecta
FBgn0112613
N
0.711