Glyma18g02820.1 (Glycine max)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 Glyma18g02820.1 T61303_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
eIF-2alpha
M231_0.6 		Drosophila melanogaster WGCAUG RNAcompete
Ray et al.(2013)
RNCMPT00273 		0.750
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma18g02820.1 S1 14 89

Links

Other S1 family RBPs
Other Glycine max RBPs

252 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1Plus.C_80350 Agaricus bisporus estExt_Genewise1Plus.C_80350 I 0.776
Ame_R013633 Ailuropoda melanoleuca Ame_R013633 I 0.750
AMAG_01618 Allomyces macrogynus AMAG_01618 I 0.724
AMAG_04113 Allomyces macrogynus AMAG_04113 I 0.724
AB05699.1 Alternaria brassicicola AB05699.1 I 0.750
EIF2S1 Anolis carolinensis ENSACAG00000005994 I 0.750
AGAP011190 Anopheles gambiae AGAP011190 I 0.750
amel4_ncbi_hmm23817 Apis mellifera amel4_ncbi_hmm23817 I 0.763
ARB_05709 Arthroderma benhamiae ARB_05709 I 0.750
69770 Aureococcus anophagefferens 69770 I 0.763
72304 Aureococcus anophagefferens 72304 I 0.763
fgenesh1_pm.C_scaffold_10000060 Batrachochytrium dendrobatidis fgenesh1_pm.C_scaffold_10000060 I 0.789
BDBG_06604 Blastomyces dermatitidis BDBG_06604 I 0.763
BGIBMGA004302 Bombyx mori BGIBMGA004302 I 0.763
IF2A_BOVIN Bos taurus ENSBTAG00000016311 I 0.750
BC1G_14334 Botrytis cinerea BC1G_14334 I 0.763
estExt_fgenesh2_pm.C_5760005 Branchiostoma floridae estExt_fgenesh2_pm.C_5760005 I 0.737
estExt_fgenesh2_pm.C_1660010 Branchiostoma floridae estExt_fgenesh2_pm.C_1660010 I 0.737
Bm1_04900 Brugia malayi Bm1_04900 I 0.750
CBN09310 Caenorhabditis brenneri CBN09310 I 0.711
CBN03344 Caenorhabditis brenneri CBN03344 I 0.711
CBG22041 Caenorhabditis briggsae CBG22041 I 0.724
Y37E3.10 Caenorhabditis elegans Y37E3.10 I 0.711
CRE03750 Caenorhabditis remanei CRE03750 I 0.711
LOC100399114 Callithrix jacchus ENSCJAG00000015368 I 0.750
EIF2S1 Canis familiaris ENSCAFG00000016386 I 0.750
estExt_Genewise1Plus.C_2350006 Capitella teleta estExt_Genewise1Plus.C_2350006 I 0.711
EIF2S1 Cavia porcellus ENSCPOG00000003313 I 0.750
CHGG_04762 Chaetomium globosum CHGG_04762 I 0.776
e_gwW.11.341.1 Chlamydomonas reinhardtii e_gwW.11.341.1 I 0.855
IGS.gm_12_00191 Chlorella NC64A IGS.gm_12_00191 I 0.829
ENSCHOG00000003744 Choloepus hoffmanni ENSCHOG00000003744 I 0.724
ENSCHOG00000004230 Choloepus hoffmanni ENSCHOG00000004230 I 0.724
ENSCHOG00000009030 Choloepus hoffmanni ENSCHOG00000009030 I 0.737
CIMG_00109 Coccidioides immitis CIMG_00109 I 0.763
CPSG_04829 Coccidioides posadasii CPSG_04829 I 0.763
estExt_fgenesh1_pg.C_210136 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_210136 I 0.750
GLRG_02833 Colletotrichum graminicola GLRG_02833 I 0.763
CC1G_08524 Coprinopsis cinerea CC1G_08524 I 0.789
e_gw1.3.2112.1 Cryphonectria parasitica e_gw1.3.2112.1 I 0.789
CMU_019420 Cryptosporidium muris CMU_019420 N 0.000
cgd7_5270 Cryptosporidium parvum cgd7_5270 I 0.000
CpipJ_CPIJ011194 Culex pipiens CpipJ_CPIJ011194 I 0.750
CPIJ011194 Culex quinquefasciatus CPIJ011194 I 0.750
eif2s1 Danio rerio ENSDARG00000052178 I 0.750
eif2s1l Danio rerio ENSDARG00000005827 I 0.750
Eif2s1 Dipodomys ordii ENSDORG00000002382 I 0.750
GF19374 Drosophila ananassae FBgn0096384 I 0.750
GG19321 Drosophila erecta FBgn0111525 I 0.750
eIF-2alpha Drosophila melanogaster FBgn0261609 D 0.750
GI21763 Drosophila mojavensis FBgn0144493 I 0.750
GL20268 Drosophila persimilis FBgn0157863 I 0.750
GA22144-RA Drosophila pseudoobscura FBgn0082124 I 0.750
GM13399 Drosophila sechellia FBgn0168330 I 0.750
GD15749 Drosophila simulans FBgn0187410 I 0.750
GJ19141 Drosophila virilis FBgn0206286 I 0.750
GK25248 Drosophila willistoni FBgn0227207 I 0.750
GE15968 Drosophila yakuba FBgn0233524 I 0.750
EIF2S1 Echinops telfairi ENSETEG00000019003 I 0.750
LOC100052709 Equus caballus ENSECAG00000018424 I 0.750
EIF2S1 Erinaceus europaeus ENSEEUG00000010225 I 0.750
FGSG_06220 Fusarium graminearum FGSG_06220 I 0.750
FOXG_08491 Fusarium oxysporum FOXG_08491 I 0.763
FVEG_06185 Fusarium verticillioides FVEG_06185 I 0.763
IF2A_CHICK Gallus gallus ENSGALG00000009565 I 0.750
EIF2S1 Gasterosteus aculeatus ENSGACG00000008569 I 0.750
EIF2S1 Gorilla gorilla ENSGGOG00000001603 I 0.750
114622 Helobdella robusta 114622 I 0.737
estExt_fgenesh2_pm.C_120283 Heterobasidion annosum estExt_fgenesh2_pm.C_120283 I 0.776
HCAG_01136 Histoplasma capsulatum HCAG_01136 I 0.750
EIF2S1 Homo sapiens ENSG00000134001 I 0.750
ISCW017360 Ixodes scapularis ISCW017360 I 0.737
e_gwh1.12.106.1 Laccaria bicolor e_gwh1.12.106.1 I 0.789
LOAG_09556 Loa loa LOAG_09556 I 0.750
estExt_fgenesh2_pm.C_sca_10068 Lottia gigantea estExt_fgenesh2_pm.C_sca_10068 I 0.737
EIF2S1 Loxodonta africana ENSLAFG00000013423 I 0.750
EIF2S1 Macaca mulatta ENSMMUG00000021419 I 0.750
MGG_13200 Magnaporthe oryzae MGG_13200 I 0.763
cassava7659.valid.m1 Manihot esculenta cassava7659.valid.m1 I 0.987
cassava7658.valid.m1 Manihot esculenta cassava7658.valid.m1 I 0.987
Medtr3g094720 Medicago truncatula Medtr3g094720 I 0.961
fgenesh1_pg.C_scaffold_2000543 Melampsora laricis populina fgenesh1_pg.C_scaffold_2000543 I 0.763
EIF2S1 Meleagris gallopavo ENSMGAG00000011974 I 0.750
EIF2S1 Microcebus murinus ENSMICG00000010793 I 0.750
MCYG_00123 Microsporum canis MCYG_00123 I 0.750
MGYG_00686 Microsporum gypseum MGYG_00686 I 0.750
EIF2S1 Monodelphis domestica ENSMODG00000009911 I 0.750
Eif2s1 Mus musculus ENSMUSG00000021116 I 0.750
estExt_fgenesh1_kg.C_10157 Myceliophthora thermophila estExt_fgenesh1_kg.C_10157 I 0.776
estExt_fgenesh1_pg.C_20141 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_20141 I 0.763
estExt_fgenesh1_pm.C_chr_100036 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_100036 I 0.763
nasonia_NCBI_hmm338664 Nasonia vitripennis nasonia_NCBI_hmm338664 I 0.763
estExt_Genewise1Plus.C_sca_18_chr2_1_00859 Nectria haematococca estExt_Genewise1Plus.C_sca_18_chr2_1_00859 I 0.763
e_gw.114.57.1 Nematostella vectensis e_gw.114.57.1 I 0.776
estExt_GenewiseH_1.C_750056 Nematostella vectensis estExt_GenewiseH_1.C_750056 I 0.776
NCLIV_056550 Neospora caninum NCLIV_056550 I 0.724
NCU08277 Neurospora crassa NCU08277 I 0.776
estExt_fgenesh3_kg.C_30291 Neurospora discreta estExt_fgenesh3_kg.C_30291 I 0.776
estExt_fgenesh2_kg.C_40048 Neurospora tetrasperma estExt_fgenesh2_kg.C_40048 I 0.776
EIF2S1 Ochotona princeps ENSOPRG00000004520 I 0.750
EIF2S1 Ornithorhynchus anatinus ENSOANG00000005409 I 0.750
IF2A_RABIT Oryctolagus cuniculus ENSOCUG00000012023 I 0.750
EIF2S1 Oryzias latipes ENSORLG00000011844 I 0.750
EIF2S1 Pan troglodytes ENSPTRG00000006462 I 0.750
PMAA_021520 Penicillium marneffei PMAA_021520 I 0.763
EAT79164.1 Phaeosphaeria nodorum EAT79164.1 I 0.750
e_gww2.12.213.1 Phanerochaete chrysosporium e_gww2.12.213.1 I 0.789
PITG_07885 Phytophthora infestans PITG_07885 I 0.776
fgenesh1_pm.C_scaffold_69000005 Phytophthora ramorum fgenesh1_pm.C_scaffold_69000005 I 0.776
PBANKA_021210 Plasmodium berghei PBANKA_021210 N 0.000
PCHAS_021050 Plasmodium chabaudi PCHAS_021050 N 0.000
PF07_0117 Plasmodium falciparum PF07_0117 N 0.000
PKH_021240 Plasmodium knowlesi PKH_021240 N 0.000
PVX_081705 Plasmodium vivax PVX_081705 N 0.000
PY00093 Plasmodium yoelii PY00093 N 0.000
genemark.2222_g Pleurotus ostreatus genemark.2222_g I 0.789
PredSwiss_EST393.1 Pneumocystis carinii PredSwiss_EST393.1 I 0.789
Pa_6_5980 Podospora anserina Pa_6_5980 I 0.776
ENSPPYG00000005921 Pongo pygmaeus ENSPPYG00000005921 I 0.750
estExt_Genewise1.C_100122 Postia placenta estExt_Genewise1.C_100122 I 0.789
EIF2S1 Procavia capensis ENSPCAG00000002613 I 0.750
EIF2S1 Pteropus vampyrus ENSPVAG00000003040 I 0.724
PTRG_05239 Pyrenophora tritici repentis PTRG_05239 I 0.750
Eif2s1 Rattus norvegicus ENSRNOG00000009432 I 0.750
estExt_Genewise1.C_30452 Schizophyllum commune estExt_Genewise1.C_30452 I 0.789
SPOG_03916 Schizosaccharomyces cryophilus SPOG_03916 I 0.724
SJAG_03629 Schizosaccharomyces japonicus SJAG_03629 I 0.724
SOCG_01617 Schizosaccharomyces octosporus SOCG_01617 I 0.724
tif211 Schizosaccharomyces pombe SPAC3G9.09c I 0.724
estExt_fgenesh1_pm.C_210071 Selaginella moellendorfii estExt_fgenesh1_pm.C_210071 I 0.868
estExt_fgenesh2_kg.C_21286 Serpula lacrymans estExt_fgenesh2_kg.C_21286 I 0.776
EIF2S1 Sorex araneus ENSSARG00000011682 I 0.750
EIF2S1 Spermophilus tridecemlineatus ENSSTOG00000001565 I 0.750
SPPG_00622 Spizellomyces punctatus SPPG_00622 I 0.776
estExt_fgenesh1_kg.C_130002 Sporobolomyces roseus estExt_fgenesh1_kg.C_130002 I 0.763
SNOG_13280 Stagonospora nodorum SNOG_13280 I 0.750
XP_001176396.1 Strongylocentrotus purpuratus XP_001176396.1 I 0.711
XP_001176254.1 Strongylocentrotus purpuratus XP_001176254.1 I 0.711
XP_779939.1 Strongylocentrotus purpuratus XP_779939.1 I 0.711
XP_801812.1 Strongylocentrotus purpuratus XP_801812.1 I 0.711
EIF2S1 Sus scrofa ENSSSCG00000002289 I 0.750
EIF2S1 Taeniopygia guttata ENSTGUG00000011542 I 0.750
EIF2S1 Takifugu rubripes ENSTRUG00000017958 I 0.750
EIF2S1 Tetraodon nigroviridis ENSTNIG00000012223 I 0.750
THAPSDRAFT_105 Thalassiosira pseudonana Thaps105 I 0.763
AMSG_04936 Thecamonas trahens AMSG_04936 I 0.724
estExt_Genewise1Plus.C_10999 Thielavia terrestris estExt_Genewise1Plus.C_10999 I 0.776
TGME49_113230 Toxoplasma gondii TGME49_113230 I 0.724
TGGT1_089620 Toxoplasma gondii TGGT1_089620 I 0.724
TGVEG_097260 Toxoplasma gondii TGVEG_097260 I 0.724
estExt_Genewise1.C_100430 Trichoderma atroviride estExt_Genewise1.C_100430 I 0.763
estExt_Genewise1.C_10111 Trichoderma reesei estExt_Genewise1.C_10111 I 0.763
estExt_Genewise1.C_21511 Trichoderma virens estExt_Genewise1.C_21511 I 0.763
TEQG_01370 Trichophyton equinum TEQG_01370 I 0.750
TERG_00559 Trichophyton rubrum TERG_00559 I 0.750
TESG_05324 Trichophyton tonsurans TESG_05324 I 0.750
TRV_03711 Trichophyton verrucosum TRV_03711 I 0.750
e_gw1.7.228.1 Trichoplax adhaerens e_gw1.7.228.1 I 0.750
EIF2S1 Tursiops truncatus ENSTTRG00000015806 I 0.763
UREG_00217 Uncinocarpus reesii UREG_00217 I 0.763
VDBG_01622 Verticillium albo atrum VDBG_01622 I 0.763
VDAG_01930 Verticillium dahliae VDAG_01930 I 0.763
estExt_fgenesh4_pg.C_220183 Volvox carteri estExt_fgenesh4_pg.C_220183 I 0.855
WUBG_12485 Wuchereria bancrofti WUBG_12485 I 0.750
AAH46576 Xenopus laevis AAH46576 I 0.750
Q7ZTK4 Xenopus laevis Q7ZTK4 I 0.750