CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TGVEG_097260
(
Toxoplasma gondii
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
TGVEG_097260
T60916_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
eIF-2alpha
M231_0.6
Drosophila melanogaster
WGCAUG
RNAcompete
Ray et al.(2013)
RNCMPT00273
0.711
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TGVEG_097260
S1
33
107
PDVEDLVMVKVNRIADLGAYVSLLEYNNMEGMILMSELSKRRFRSVNKLIRVGRHEVVMVLRVDPKKGYIDLSKR
Links
Other
S1
family RBPs
Other
Toxoplasma gondii
RBPs
174 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NCLIV_056550
Neospora caninum
NCLIV_056550
I
1.000
TGGT1_089620
Toxoplasma gondii
TGGT1_089620
I
1.000
TGME49_113230
Toxoplasma gondii
TGME49_113230
I
1.000
PCHAS_021050
Plasmodium chabaudi
PCHAS_021050
N
0.867
PBANKA_021210
Plasmodium berghei
PBANKA_021210
N
0.867
PF07_0117
Plasmodium falciparum
PF07_0117
N
0.867
PKH_021240
Plasmodium knowlesi
PKH_021240
N
0.867
PY00093
Plasmodium yoelii
PY00093
N
0.867
PVX_081705
Plasmodium vivax
PVX_081705
N
0.867
LOAG_09556
Loa loa
LOAG_09556
I
0.773
Bm1_04900
Brugia malayi
Bm1_04900
I
0.773
WUBG_12485
Wuchereria bancrofti
WUBG_12485
I
0.773
THAPSDRAFT_105
Thalassiosira pseudonana
Thaps105
I
0.763
PITG_07885
Phytophthora infestans
PITG_07885
I
0.760
72304
Aureococcus anophagefferens
72304
I
0.760
fgenesh1_pm.C_scaffold_69000005
Phytophthora ramorum
fgenesh1_pm.C_scaffold_69000005
I
0.760
69770
Aureococcus anophagefferens
69770
I
0.760
PredSwiss_EST393.1
Pneumocystis carinii
PredSwiss_EST393.1
I
0.750
e_gw1.18.114.1
Tremella mesenterica
e_gw1.18.114.1
I
0.750
TP01_0853
Theileria parva
TP01_0853
N
0.747
IF2A_BOVIN
Bos taurus
ENSBTAG00000016311
I
0.747
EIF2S1
Monodelphis domestica
ENSMODG00000009911
I
0.747
EIF2S1
Meleagris gallopavo
ENSMGAG00000011974
I
0.747
Eif2s1
Mus musculus
ENSMUSG00000021116
I
0.747
EIF2S1
Macaca mulatta
ENSMMUG00000021419
I
0.747
EIF2S1
Microcebus murinus
ENSMICG00000010793
I
0.747
EIF2S1
Ornithorhynchus anatinus
ENSOANG00000005409
I
0.747
EIF2S1
Procavia capensis
ENSPCAG00000002613
I
0.747
ENSPPYG00000005921
Pongo pygmaeus
ENSPPYG00000005921
I
0.747
EIF2S1
Oryzias latipes
ENSORLG00000011844
I
0.747
EIF2S1
Ochotona princeps
ENSOPRG00000004520
I
0.747
MDP0000155133
Malus x domestica
MDP0000155133
I
0.747
IF2A_RABIT
Oryctolagus cuniculus
ENSOCUG00000012023
I
0.747
EIF2S1
Loxodonta africana
ENSLAFG00000013423
I
0.747
RO3G_12494
Rhizopus oryzae
RO3G_12494
I
0.747
Eif2s1
Dipodomys ordii
ENSDORG00000002382
I
0.747
LOC100052709
Equus caballus
ENSECAG00000018424
I
0.747
EIF2S1
Erinaceus europaeus
ENSEEUG00000010225
I
0.747
eif2s1
Danio rerio
ENSDARG00000052178
I
0.747
eif2s1l
Danio rerio
ENSDARG00000005827
I
0.747
LOC100399114
Callithrix jacchus
ENSCJAG00000015368
I
0.747
EIF2S1
Cavia porcellus
ENSCPOG00000003313
I
0.747
EIF2S1
Echinops telfairi
ENSETEG00000019003
I
0.747
EIF2S1
Homo sapiens
ENSG00000134001
I
0.747
EIF2S1
Anolis carolinensis
ENSACAG00000005994
I
0.747
RO3G_13185
Rhizopus oryzae
RO3G_13185
I
0.747
EIF2S1
Gorilla gorilla
ENSGGOG00000001603
I
0.747
SPPG_00622
Spizellomyces punctatus
SPPG_00622
I
0.747
EIF2S1
Gasterosteus aculeatus
ENSGACG00000008569
I
0.747
IF2A_CHICK
Gallus gallus
ENSGALG00000009565
I
0.747
EIF2S1
Canis familiaris
ENSCAFG00000016386
I
0.747
EIF2S1
Pan troglodytes
ENSPTRG00000006462
I
0.747
EIF2S1
Takifugu rubripes
ENSTRUG00000017958
I
0.747
estExt_fgenesh2_pm.C_sca_10068
Lottia gigantea
estExt_fgenesh2_pm.C_sca_10068
I
0.747
EIF2S1
Tetraodon nigroviridis
ENSTNIG00000012223
I
0.747
PPA05168
Pristionchus pacificus
PPA05168
I
0.747
e_gw1.7.228.1
Trichoplax adhaerens
e_gw1.7.228.1
I
0.747
estExt_Genewise1.C_51162
Mucor circinelloides
estExt_Genewise1.C_51162
I
0.747
cgd7_5270
Cryptosporidium parvum
cgd7_5270
I
0.747
Chro.70587
Cryptosporidium hominis
Chro.70587
I
0.747
EIF2S1
Taeniopygia guttata
ENSTGUG00000011542
I
0.747
EIF2S1
Sorex araneus
ENSSARG00000011682
I
0.747
Eif2s1
Rattus norvegicus
ENSRNOG00000009432
I
0.747
Ame_R013633
Ailuropoda melanoleuca
Ame_R013633
I
0.747
EIF2S1
Sus scrofa
ENSSSCG00000002289
I
0.747
EDO07273.1
Babesia bovis
EDO07273.1
N
0.747
EIF2S1
Spermophilus tridecemlineatus
ENSSTOG00000001565
I
0.747
e_gwh1.12.106.1
Laccaria bicolor
e_gwh1.12.106.1
I
0.737
cassava7658.valid.m1
Manihot esculenta
cassava7658.valid.m1
I
0.737
CC1G_08524
Coprinopsis cinerea
CC1G_08524
I
0.737
fgenesh1_pm.C_scaffold_10000060
Batrachochytrium dendrobatidis
fgenesh1_pm.C_scaffold_10000060
I
0.737
TA06015
Theileria annulata
TA06015
N
0.737
estExt_Genewise1.C_110295
Coccomyxa C 169
estExt_Genewise1.C_110295
I
0.737
estExt_Genewise1.C_100332
Chlorella vulgaris
estExt_Genewise1.C_100332
I
0.737
cassava7659.valid.m1
Manihot esculenta
cassava7659.valid.m1
I
0.737
estExt_Genewise1.C_30452
Schizophyllum commune
estExt_Genewise1.C_30452
I
0.737
Medtr3g094720
Medicago truncatula
Medtr3g094720
I
0.737
CMU_019420
Cryptosporidium muris
CMU_019420
N
0.733
ENSCHOG00000009030
Choloepus hoffmanni
ENSCHOG00000009030
I
0.733
estExt_Genewise1Plus.C_2350006
Capitella teleta
estExt_Genewise1Plus.C_2350006
I
0.733
AAH46576
Xenopus laevis
AAH46576
I
0.733
XP_801812.1
Strongylocentrotus purpuratus
XP_801812.1
I
0.733
XP_779939.1
Strongylocentrotus purpuratus
XP_779939.1
I
0.733
XP_001176396.1
Strongylocentrotus purpuratus
XP_001176396.1
I
0.733
XP_001176254.1
Strongylocentrotus purpuratus
XP_001176254.1
I
0.733
estExt_fgenesh1_pm.C_210071
Selaginella moellendorfii
estExt_fgenesh1_pm.C_210071
I
0.733
Q7ZTK4
Xenopus laevis
Q7ZTK4
I
0.733
IGS.gm_12_00191
Chlorella NC64A
IGS.gm_12_00191
I
0.733
Minc01303
Meloidogyne incognita
Minc01303
I
0.733
EIF2S1
Pteropus vampyrus
ENSPVAG00000003040
I
0.733
AMSG_04936
Thecamonas trahens
AMSG_04936
I
0.733
EIF2S1
Tursiops truncatus
ENSTTRG00000015806
I
0.733
Cucsa.239320
Cucumis sativus
Cucsa.239320
I
0.724
29607.m000238
Ricinus communis
29607.m000238
I
0.724
XM_002881666.1
Arabidopsis lyrata
fgenesh2_kg.4__2141__AT2G40290.1
I
0.724
GSVIVG00024676001
Vitis vinifera
GSVIVG00024676001
I
0.724
PHATRDRAFT_34538
Phaeodactylum tricornutum
Phatr34538
I
0.724
B9HHU6_POPTR
Populus trichocarpa
POPTR_0008s07250
I
0.724
B9HSK1_POPTR
Populus trichocarpa
POPTR_0010s19230
I
0.724
e_gw.114.57.1
Nematostella vectensis
e_gw.114.57.1
I
0.724
AT2G40290
Arabidopsis thaliana
AT2G40290-TAIR-G
I
0.724
genemark.2222_g
Pleurotus ostreatus
genemark.2222_g
I
0.724
estExt_Genewise1Plus.C_80350
Agaricus bisporus
estExt_Genewise1Plus.C_80350
I
0.724
estExt_fgenesh2_kg.C_21286
Serpula lacrymans
estExt_fgenesh2_kg.C_21286
I
0.724
LjSGA_031492.1
Lotus japonicus
LjSGA_031492.1
I
0.724
MDP0000663428
Malus x domestica
MDP0000663428
I
0.724
e_gwW.11.341.1
Chlamydomonas reinhardtii
e_gwW.11.341.1
I
0.724
ppa008120m
Prunus persica
ppa008120m
I
0.724
Medtr3g094740
Medicago truncatula
Medtr3g094740
I
0.724
Medtr3g094730
Medicago truncatula
Medtr3g094730
I
0.724
estExt_fgenesh4_pg.C_220183
Volvox carteri
estExt_fgenesh4_pg.C_220183
I
0.724
estExt_fgenesh2_kg.C_20112
Fragilariopsis cylindrus
estExt_fgenesh2_kg.C_20112
I
0.724
estExt_Genewise1.C_100122
Postia placenta
estExt_Genewise1.C_100122
I
0.724
estExt_GenewiseH_1.C_750056
Nematostella vectensis
estExt_GenewiseH_1.C_750056
I
0.724
Glyma18g02820.1
Glycine max
Glyma18g02820.1
I
0.724
Glyma11g35600.1
Glycine max
Glyma11g35600.1
I
0.724
CpipJ_CPIJ011194
Culex pipiens
CpipJ_CPIJ011194
I
0.724
BGIBMGA004302
Bombyx mori
BGIBMGA004302
I
0.724
CPIJ011194
Culex quinquefasciatus
CPIJ011194
I
0.724
AAEL013675
Aedes aegypti
AAEL013675
I
0.724
AGAP011190
Anopheles gambiae
AGAP011190
I
0.724
e_gww2.12.213.1
Phanerochaete chrysosporium
e_gww2.12.213.1
I
0.724
amel4_ncbi_hmm23817
Apis mellifera
amel4_ncbi_hmm23817
I
0.724
nasonia_NCBI_hmm338664
Nasonia vitripennis
nasonia_NCBI_hmm338664
I
0.724
PK10564.1
Cannabis sativa
PK10564.1
I
0.724
CBN09310
Caenorhabditis brenneri
CBN09310
I
0.720
CBG22041
Caenorhabditis briggsae
CBG22041
I
0.720
estExt_Genewise1Plus.C_230113
Phycomyces blakesleeanus
estExt_Genewise1Plus.C_230113
I
0.720
CBN03344
Caenorhabditis brenneri
CBN03344
I
0.720
CRE03750
Caenorhabditis remanei
CRE03750
I
0.720
estExt_fgenesh1_pg.C_210283
Phytophthora capsici
estExt_fgenesh1_pg.C_210283
I
0.720
Y37E3.10
Caenorhabditis elegans
Y37E3.10
I
0.720
EIF2
Arabidopsis thaliana
AT5G05470-TAIR-G
I
0.720
fgenesh_newKGs_kg.236__13__EST_ALL.fasta.Contig10263
Emiliania huxleyi
fgenesh_newKGs_kg.236__13__EST_ALL.fasta.Contig10263
I
0.720
ENSCHOG00000004230
Choloepus hoffmanni
ENSCHOG00000004230
I
0.720
cassava16515.m1
Manihot esculenta
cassava16515.m1
I
0.720
estExt_fgenesh2_pm.C_1660010
Branchiostoma floridae
estExt_fgenesh2_pm.C_1660010
I
0.720
XP_002156465.1
Hydra magnipapillata
XP_002156465.1
I
0.720
estExt_fgenesh2_pm.C_5760005
Branchiostoma floridae
estExt_fgenesh2_pm.C_5760005
I
0.720
ENSCHOG00000003744
Choloepus hoffmanni
ENSCHOG00000003744
I
0.720
CAOG_02542
Capsaspora owczarzaki
CAOG_02542
I
0.714
PASA_GEN_0500123
Daphnia pulex
PASA_GEN_0500123
I
0.711
EAT79164.1
Phaeosphaeria nodorum
EAT79164.1
I
0.711
estExt_fgenesh1_pg.C_210136
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_210136
I
0.711
eIF-2alpha
Drosophila melanogaster
FBgn0261609
D
0.711
fgeneshHS_pg.scaffold_37000098
Naegleria gruberi
fgeneshHS_pg.scaffold_37000098
N
0.711
fgenesh1_pg.scaffold_55000187
Physcomitrella patens
fgenesh1_pg.scaffold_55000187
I
0.711
GE15968
Drosophila yakuba
FBgn0233524
I
0.711
PHUM551010
Pediculus humanus
PHUM551010
I
0.711
GL20268
Drosophila persimilis
FBgn0157863
I
0.711
e_gw1.3.2112.1
Cryphonectria parasitica
e_gw1.3.2112.1
I
0.711
AB05699.1
Alternaria brassicicola
AB05699.1
I
0.711
GK25248
Drosophila willistoni
FBgn0227207
I
0.711
estExt_fgenesh2_pm.C_120283
Heterobasidion annosum
estExt_fgenesh2_pm.C_120283
I
0.711
KLTH0B02002g
Kluyveromyces thermotolerans
KLTH0B02002g
I
0.711
SNOG_13280
Stagonospora nodorum
SNOG_13280
I
0.711
Kwal_15422
Kluyveromyces waltii
Kwal_15422
I
0.711
GA22144-RA
Drosophila pseudoobscura
FBgn0082124
I
0.711
EIF2S1
Tarsius syrichta
ENSTSYG00000014171
I
0.711
GF19374
Drosophila ananassae
FBgn0096384
I
0.711
GD15749
Drosophila simulans
FBgn0187410
I
0.711
GJ19141
Drosophila virilis
FBgn0206286
I
0.711
PTRG_05239
Pyrenophora tritici repentis
PTRG_05239
I
0.711
GM13399
Drosophila sechellia
FBgn0168330
I
0.711
GI21763
Drosophila mojavensis
FBgn0144493
I
0.711
GG19321
Drosophila erecta
FBgn0111525
I
0.711
BRADI1G16700
Brachypodium distachyon
BRADI1G16700
I
0.707
estExt_fgenesh1_kg.C_70012
Micromonas pusilla
estExt_fgenesh1_kg.C_70012
I
0.707
estExt_fgenesh1_kg.C_130002
Sporobolomyces roseus
estExt_fgenesh1_kg.C_130002
I
0.707
114622
Helobdella robusta
114622
I
0.707
XM_002873169.1
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_6000426
N
0.707
KLLA0A11814g
Kluyveromyces lactis
KLLA0A11814g
I
0.707
estExt_fgenesh1_pg.C_Chr_02.00010078
Ostreococcus tauri
estExt_fgenesh1_pg.C_Chr_02.00010078
I
0.707
fgenesh1_pg.C_scaffold_2000543
Melampsora laricis populina
fgenesh1_pg.C_scaffold_2000543
I
0.707