CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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cgd7_5270
(
Cryptosporidium parvum
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
cgd7_5270
T60806_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
eIF-2alpha
M231_0.6
Drosophila melanogaster
WGCAUG
RNAcompete
Ray et al.(2013)
RNCMPT00273
0.711
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
cgd7_5270
S1
39
113
PEPEEFVMARVKRITEVGAFVSLLEYNDIEGMILMSELSKRRIRSVNKLTRVGRLEVVVVLRVDKNKGYIDLSKR
Links
Other
S1
family RBPs
Other
Cryptosporidium parvum
RBPs
166 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Chro.70587
Cryptosporidium hominis
Chro.70587
I
1.000
CMU_019420
Cryptosporidium muris
CMU_019420
N
0.987
PredSwiss_EST393.1
Pneumocystis carinii
PredSwiss_EST393.1
I
0.750
fgenesh1_pm.C_scaffold_69000005
Phytophthora ramorum
fgenesh1_pm.C_scaffold_69000005
I
0.747
TGME49_113230
Toxoplasma gondii
TGME49_113230
I
0.747
TGVEG_097260
Toxoplasma gondii
TGVEG_097260
I
0.747
TGGT1_089620
Toxoplasma gondii
TGGT1_089620
I
0.747
PITG_07885
Phytophthora infestans
PITG_07885
I
0.747
NCLIV_056550
Neospora caninum
NCLIV_056550
I
0.747
SNOG_13280
Stagonospora nodorum
SNOG_13280
I
0.737
AB05699.1
Alternaria brassicicola
AB05699.1
I
0.737
VDBG_01622
Verticillium albo atrum
VDBG_01622
I
0.737
PTRG_05239
Pyrenophora tritici repentis
PTRG_05239
I
0.737
EAT79164.1
Phaeosphaeria nodorum
EAT79164.1
I
0.737
FGSG_06220
Fusarium graminearum
FGSG_06220
I
0.737
GLRG_02833
Colletotrichum graminicola
GLRG_02833
I
0.737
VDAG_01930
Verticillium dahliae
VDAG_01930
I
0.737
ISCW017360
Ixodes scapularis
ISCW017360
I
0.737
estExt_fgenesh1_pg.C_210136
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_210136
I
0.737
CBN03344
Caenorhabditis brenneri
CBN03344
I
0.733
EIF2S1
Anolis carolinensis
ENSACAG00000005994
I
0.733
EIF2S1
Canis familiaris
ENSCAFG00000016386
I
0.733
EIF2S1
Cavia porcellus
ENSCPOG00000003313
I
0.733
IF2A_BOVIN
Bos taurus
ENSBTAG00000016311
I
0.733
LOC100399114
Callithrix jacchus
ENSCJAG00000015368
I
0.733
CRE03750
Caenorhabditis remanei
CRE03750
I
0.733
CBN09310
Caenorhabditis brenneri
CBN09310
I
0.733
TERG_00559
Trichophyton rubrum
TERG_00559
I
0.733
SPPG_00622
Spizellomyces punctatus
SPPG_00622
I
0.733
MGYG_00686
Microsporum gypseum
MGYG_00686
I
0.733
MCYG_00123
Microsporum canis
MCYG_00123
I
0.733
LOAG_09556
Loa loa
LOAG_09556
I
0.733
TEQG_01370
Trichophyton equinum
TEQG_01370
I
0.733
eif2s1l
Danio rerio
ENSDARG00000005827
I
0.733
WUBG_12485
Wuchereria bancrofti
WUBG_12485
I
0.733
TRV_03711
Trichophyton verrucosum
TRV_03711
I
0.733
TESG_05324
Trichophyton tonsurans
TESG_05324
I
0.733
CBG22041
Caenorhabditis briggsae
CBG22041
I
0.733
EIF2S1
Erinaceus europaeus
ENSEEUG00000010225
I
0.733
ENSPPYG00000005921
Pongo pygmaeus
ENSPPYG00000005921
I
0.733
EIF2S1
Pan troglodytes
ENSPTRG00000006462
I
0.733
EIF2S1
Procavia capensis
ENSPCAG00000002613
I
0.733
EIF2S1
Oryzias latipes
ENSORLG00000011844
I
0.733
IF2A_RABIT
Oryctolagus cuniculus
ENSOCUG00000012023
I
0.733
EIF2S1
Ochotona princeps
ENSOPRG00000004520
I
0.733
Eif2s1
Rattus norvegicus
ENSRNOG00000009432
I
0.733
EIF2S1
Sorex araneus
ENSSARG00000011682
I
0.733
EIF2S1
Takifugu rubripes
ENSTRUG00000017958
I
0.733
Y37E3.10
Caenorhabditis elegans
Y37E3.10
I
0.733
EIF2S1
Tetraodon nigroviridis
ENSTNIG00000012223
I
0.733
EIF2S1
Taeniopygia guttata
ENSTGUG00000011542
I
0.733
EIF2S1
Sus scrofa
ENSSSCG00000002289
I
0.733
EIF2S1
Spermophilus tridecemlineatus
ENSSTOG00000001565
I
0.733
EIF2S1
Ornithorhynchus anatinus
ENSOANG00000005409
I
0.733
Eif2s1
Mus musculus
ENSMUSG00000021116
I
0.733
EIF2S1
Homo sapiens
ENSG00000134001
I
0.733
EIF2S1
Gasterosteus aculeatus
ENSGACG00000008569
I
0.733
EIF2S1
Echinops telfairi
ENSETEG00000019003
I
0.733
Bm1_04900
Brugia malayi
Bm1_04900
I
0.733
Eif2s1
Dipodomys ordii
ENSDORG00000002382
I
0.733
LOC100052709
Equus caballus
ENSECAG00000018424
I
0.733
IF2A_CHICK
Gallus gallus
ENSGALG00000009565
I
0.733
EIF2S1
Gorilla gorilla
ENSGGOG00000001603
I
0.733
EIF2S1
Macaca mulatta
ENSMMUG00000021419
I
0.733
EIF2S1
Monodelphis domestica
ENSMODG00000009911
I
0.733
EIF2S1
Microcebus murinus
ENSMICG00000010793
I
0.733
EIF2S1
Meleagris gallopavo
ENSMGAG00000011974
I
0.733
EIF2S1
Loxodonta africana
ENSLAFG00000013423
I
0.733
eif2s1
Danio rerio
ENSDARG00000052178
I
0.733
HCAG_01136
Histoplasma capsulatum
HCAG_01136
I
0.733
fgenesh1_pg.C_scaffold_2000543
Melampsora laricis populina
fgenesh1_pg.C_scaffold_2000543
I
0.733
PVX_081705
Plasmodium vivax
PVX_081705
N
0.733
Ame_R013633
Ailuropoda melanoleuca
Ame_R013633
I
0.733
PKH_021240
Plasmodium knowlesi
PKH_021240
N
0.733
72304
Aureococcus anophagefferens
72304
I
0.733
PF07_0117
Plasmodium falciparum
PF07_0117
N
0.733
PCHAS_021050
Plasmodium chabaudi
PCHAS_021050
N
0.733
PY00093
Plasmodium yoelii
PY00093
N
0.733
ARB_05709
Arthroderma benhamiae
ARB_05709
I
0.733
e_gw1.7.228.1
Trichoplax adhaerens
e_gw1.7.228.1
I
0.733
69770
Aureococcus anophagefferens
69770
I
0.733
PBANKA_021210
Plasmodium berghei
PBANKA_021210
N
0.733
estExt_fgenesh2_pm.C_sca_10068
Lottia gigantea
estExt_fgenesh2_pm.C_sca_10068
I
0.733
estExt_fgenesh1_kg.C_130002
Sporobolomyces roseus
estExt_fgenesh1_kg.C_130002
I
0.733
UREG_00217
Uncinocarpus reesii
UREG_00217
I
0.724
fgenesh1_pm.C_scaffold_10000060
Batrachochytrium dendrobatidis
fgenesh1_pm.C_scaffold_10000060
I
0.724
estExt_Genewise1.C_30452
Schizophyllum commune
estExt_Genewise1.C_30452
I
0.724
estExt_Genewise1.C_21511
Trichoderma virens
estExt_Genewise1.C_21511
I
0.724
estExt_Genewise1.C_10111
Trichoderma reesei
estExt_Genewise1.C_10111
I
0.724
BC1G_14334
Botrytis cinerea
BC1G_14334
I
0.724
estExt_Genewise1Plus.C_sca_18_chr2_1_00859
Nectria haematococca
estExt_Genewise1Plus.C_sca_18_chr2_1_00859
I
0.724
estExt_Genewise1.C_100122
Postia placenta
estExt_Genewise1.C_100122
I
0.724
estExt_Genewise1.C_100430
Trichoderma atroviride
estExt_Genewise1.C_100430
I
0.724
AGAP011190
Anopheles gambiae
AGAP011190
I
0.724
genemark.2222_g
Pleurotus ostreatus
genemark.2222_g
I
0.724
FOXG_08491
Fusarium oxysporum
FOXG_08491
I
0.724
estExt_fgenesh1_pm.C_chr_100036
Mycosphaerella graminicola
estExt_fgenesh1_pm.C_chr_100036
I
0.724
e_gwh1.12.106.1
Laccaria bicolor
e_gwh1.12.106.1
I
0.724
CPSG_04829
Coccidioides posadasii
CPSG_04829
I
0.724
FVEG_06185
Fusarium verticillioides
FVEG_06185
I
0.724
e_gww2.12.213.1
Phanerochaete chrysosporium
e_gww2.12.213.1
I
0.724
BDBG_06604
Blastomyces dermatitidis
BDBG_06604
I
0.724
CC1G_08524
Coprinopsis cinerea
CC1G_08524
I
0.724
estExt_fgenesh1_pg.C_20141
Mycosphaerella fijiensis
estExt_fgenesh1_pg.C_20141
I
0.724
CIMG_00109
Coccidioides immitis
CIMG_00109
I
0.724
AMSG_04936
Thecamonas trahens
AMSG_04936
I
0.720
estExt_Genewise1Plus.C_2350006
Capitella teleta
estExt_Genewise1Plus.C_2350006
I
0.720
ENSCHOG00000009030
Choloepus hoffmanni
ENSCHOG00000009030
I
0.720
114622
Helobdella robusta
114622
I
0.720
Q7ZTK4
Xenopus laevis
Q7ZTK4
I
0.720
AMAG_04113
Allomyces macrogynus
AMAG_04113
I
0.720
XP_001176396.1
Strongylocentrotus purpuratus
XP_001176396.1
I
0.720
XP_001176254.1
Strongylocentrotus purpuratus
XP_001176254.1
I
0.720
XP_801812.1
Strongylocentrotus purpuratus
XP_801812.1
I
0.720
XP_779939.1
Strongylocentrotus purpuratus
XP_779939.1
I
0.720
AAH46576
Xenopus laevis
AAH46576
I
0.720
AMAG_01618
Allomyces macrogynus
AMAG_01618
I
0.720
EIF2S1
Tursiops truncatus
ENSTTRG00000015806
I
0.720
e_gw.114.57.1
Nematostella vectensis
e_gw.114.57.1
I
0.711
cassava7658.valid.m1
Manihot esculenta
cassava7658.valid.m1
I
0.711
cassava7659.valid.m1
Manihot esculenta
cassava7659.valid.m1
I
0.711
GG19321
Drosophila erecta
FBgn0111525
I
0.711
GE15968
Drosophila yakuba
FBgn0233524
I
0.711
GK25248
Drosophila willistoni
FBgn0227207
I
0.711
eIF-2alpha
Drosophila melanogaster
FBgn0261609
D
0.711
NCU08277
Neurospora crassa
NCU08277
I
0.711
THAPSDRAFT_105
Thalassiosira pseudonana
Thaps105
I
0.711
GJ19141
Drosophila virilis
FBgn0206286
I
0.711
GD15749
Drosophila simulans
FBgn0187410
I
0.711
e_gwW.11.341.1
Chlamydomonas reinhardtii
e_gwW.11.341.1
I
0.711
GF19374
Drosophila ananassae
FBgn0096384
I
0.711
GI21763
Drosophila mojavensis
FBgn0144493
I
0.711
GL20268
Drosophila persimilis
FBgn0157863
I
0.711
GM13399
Drosophila sechellia
FBgn0168330
I
0.711
GA22144-RA
Drosophila pseudoobscura
FBgn0082124
I
0.711
estExt_Genewise1Plus.C_10999
Thielavia terrestris
estExt_Genewise1Plus.C_10999
I
0.711
e_gw1.3.2112.1
Cryphonectria parasitica
e_gw1.3.2112.1
I
0.711
estExt_fgenesh2_kg.C_21286
Serpula lacrymans
estExt_fgenesh2_kg.C_21286
I
0.711
amel4_ncbi_hmm23817
Apis mellifera
amel4_ncbi_hmm23817
I
0.711
nasonia_NCBI_hmm338664
Nasonia vitripennis
nasonia_NCBI_hmm338664
I
0.711
estExt_fgenesh1_kg.C_10157
Myceliophthora thermophila
estExt_fgenesh1_kg.C_10157
I
0.711
estExt_fgenesh2_pm.C_120283
Heterobasidion annosum
estExt_fgenesh2_pm.C_120283
I
0.711
estExt_Genewise1Plus.C_80350
Agaricus bisporus
estExt_Genewise1Plus.C_80350
I
0.711
CpipJ_CPIJ011194
Culex pipiens
CpipJ_CPIJ011194
I
0.711
CHGG_04762
Chaetomium globosum
CHGG_04762
I
0.711
MGG_13200
Magnaporthe oryzae
MGG_13200
I
0.711
PMAA_021520
Penicillium marneffei
PMAA_021520
I
0.711
Pa_6_5980
Podospora anserina
Pa_6_5980
I
0.711
Medtr3g094720
Medicago truncatula
Medtr3g094720
I
0.711
BGIBMGA004302
Bombyx mori
BGIBMGA004302
I
0.711
estExt_fgenesh3_kg.C_30291
Neurospora discreta
estExt_fgenesh3_kg.C_30291
I
0.711
estExt_fgenesh4_pg.C_220183
Volvox carteri
estExt_fgenesh4_pg.C_220183
I
0.711
estExt_fgenesh2_kg.C_40048
Neurospora tetrasperma
estExt_fgenesh2_kg.C_40048
I
0.711
estExt_GenewiseH_1.C_750056
Nematostella vectensis
estExt_GenewiseH_1.C_750056
I
0.711
CPIJ011194
Culex quinquefasciatus
CPIJ011194
I
0.711
SJAG_03629
Schizosaccharomyces japonicus
SJAG_03629
I
0.707
estExt_fgenesh2_pm.C_1660010
Branchiostoma floridae
estExt_fgenesh2_pm.C_1660010
I
0.707
tif211
Schizosaccharomyces pombe
SPAC3G9.09c
I
0.707
estExt_fgenesh1_pm.C_210071
Selaginella moellendorfii
estExt_fgenesh1_pm.C_210071
I
0.707
SOCG_01617
Schizosaccharomyces octosporus
SOCG_01617
I
0.707
EIF2S1
Pteropus vampyrus
ENSPVAG00000003040
I
0.707
ENSCHOG00000003744
Choloepus hoffmanni
ENSCHOG00000003744
I
0.707
ENSCHOG00000004230
Choloepus hoffmanni
ENSCHOG00000004230
I
0.707
IGS.gm_12_00191
Chlorella NC64A
IGS.gm_12_00191
I
0.707
estExt_fgenesh2_pm.C_5760005
Branchiostoma floridae
estExt_fgenesh2_pm.C_5760005
I
0.707
SPOG_03916
Schizosaccharomyces cryophilus
SPOG_03916
I
0.707