CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CMU_019420
(
Cryptosporidium muris
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
CMU_019420
T60811_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CMU_019420
S1
19
93
PEPEEFVMARVKRITEVGAFVSLLEYNDIEGMILMSELSKRRIRSVNKLTRVGRLEVVVVLRVDKNKGYIDLSKK
Links
Other
S1
family RBPs
Other
Cryptosporidium muris
RBPs
118 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Chro.70587
Cryptosporidium hominis
Chro.70587
I
0.987
cgd7_5270
Cryptosporidium parvum
cgd7_5270
I
0.987
PredSwiss_EST393.1
Pneumocystis carinii
PredSwiss_EST393.1
I
0.737
TGVEG_097260
Toxoplasma gondii
TGVEG_097260
I
0.733
fgenesh1_pm.C_scaffold_69000005
Phytophthora ramorum
fgenesh1_pm.C_scaffold_69000005
I
0.733
TGGT1_089620
Toxoplasma gondii
TGGT1_089620
I
0.733
TGME49_113230
Toxoplasma gondii
TGME49_113230
I
0.733
NCLIV_056550
Neospora caninum
NCLIV_056550
I
0.733
PITG_07885
Phytophthora infestans
PITG_07885
I
0.733
AB05699.1
Alternaria brassicicola
AB05699.1
I
0.724
SNOG_13280
Stagonospora nodorum
SNOG_13280
I
0.724
PTRG_05239
Pyrenophora tritici repentis
PTRG_05239
I
0.724
FGSG_06220
Fusarium graminearum
FGSG_06220
I
0.724
GLRG_02833
Colletotrichum graminicola
GLRG_02833
I
0.724
estExt_fgenesh1_pg.C_210136
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_210136
I
0.724
VDAG_01930
Verticillium dahliae
VDAG_01930
I
0.724
VDBG_01622
Verticillium albo atrum
VDBG_01622
I
0.724
EAT79164.1
Phaeosphaeria nodorum
EAT79164.1
I
0.724
ISCW017360
Ixodes scapularis
ISCW017360
I
0.724
CBN09310
Caenorhabditis brenneri
CBN09310
I
0.720
CRE03750
Caenorhabditis remanei
CRE03750
I
0.720
CBN03344
Caenorhabditis brenneri
CBN03344
I
0.720
CBG22041
Caenorhabditis briggsae
CBG22041
I
0.720
EIF2S1
Anolis carolinensis
ENSACAG00000005994
I
0.720
EIF2S1
Canis familiaris
ENSCAFG00000016386
I
0.720
eif2s1l
Danio rerio
ENSDARG00000005827
I
0.720
EIF2S1
Cavia porcellus
ENSCPOG00000003313
I
0.720
LOC100399114
Callithrix jacchus
ENSCJAG00000015368
I
0.720
EIF2S1
Sorex araneus
ENSSARG00000011682
I
0.720
IF2A_BOVIN
Bos taurus
ENSBTAG00000016311
I
0.720
WUBG_12485
Wuchereria bancrofti
WUBG_12485
I
0.720
TESG_05324
Trichophyton tonsurans
TESG_05324
I
0.720
EIF2S1
Takifugu rubripes
ENSTRUG00000017958
I
0.720
Y37E3.10
Caenorhabditis elegans
Y37E3.10
I
0.720
TERG_00559
Trichophyton rubrum
TERG_00559
I
0.720
EIF2S1
Tetraodon nigroviridis
ENSTNIG00000012223
I
0.720
TRV_03711
Trichophyton verrucosum
TRV_03711
I
0.720
EIF2S1
Sus scrofa
ENSSSCG00000002289
I
0.720
EIF2S1
Spermophilus tridecemlineatus
ENSSTOG00000001565
I
0.720
EIF2S1
Taeniopygia guttata
ENSTGUG00000011542
I
0.720
eif2s1
Danio rerio
ENSDARG00000052178
I
0.720
Eif2s1
Dipodomys ordii
ENSDORG00000002382
I
0.720
EIF2S1
Macaca mulatta
ENSMMUG00000021419
I
0.720
EIF2S1
Microcebus murinus
ENSMICG00000010793
I
0.720
EIF2S1
Meleagris gallopavo
ENSMGAG00000011974
I
0.720
EIF2S1
Loxodonta africana
ENSLAFG00000013423
I
0.720
EIF2S1
Monodelphis domestica
ENSMODG00000009911
I
0.720
Eif2s1
Mus musculus
ENSMUSG00000021116
I
0.720
EIF2S1
Oryzias latipes
ENSORLG00000011844
I
0.720
EIF2S1
Ochotona princeps
ENSOPRG00000004520
I
0.720
IF2A_RABIT
Oryctolagus cuniculus
ENSOCUG00000012023
I
0.720
EIF2S1
Ornithorhynchus anatinus
ENSOANG00000005409
I
0.720
EIF2S1
Gorilla gorilla
ENSGGOG00000001603
I
0.720
ENSPPYG00000005921
Pongo pygmaeus
ENSPPYG00000005921
I
0.720
EIF2S1
Homo sapiens
ENSG00000134001
I
0.720
EIF2S1
Echinops telfairi
ENSETEG00000019003
I
0.720
EIF2S1
Erinaceus europaeus
ENSEEUG00000010225
I
0.720
LOC100052709
Equus caballus
ENSECAG00000018424
I
0.720
EIF2S1
Gasterosteus aculeatus
ENSGACG00000008569
I
0.720
IF2A_CHICK
Gallus gallus
ENSGALG00000009565
I
0.720
TEQG_01370
Trichophyton equinum
TEQG_01370
I
0.720
EIF2S1
Pan troglodytes
ENSPTRG00000006462
I
0.720
Eif2s1
Rattus norvegicus
ENSRNOG00000009432
I
0.720
EIF2S1
Procavia capensis
ENSPCAG00000002613
I
0.720
MCYG_00123
Microsporum canis
MCYG_00123
I
0.720
e_gw1.7.228.1
Trichoplax adhaerens
e_gw1.7.228.1
I
0.720
72304
Aureococcus anophagefferens
72304
I
0.720
estExt_fgenesh1_kg.C_130002
Sporobolomyces roseus
estExt_fgenesh1_kg.C_130002
I
0.720
estExt_fgenesh2_pm.C_sca_10068
Lottia gigantea
estExt_fgenesh2_pm.C_sca_10068
I
0.720
SPPG_00622
Spizellomyces punctatus
SPPG_00622
I
0.720
fgenesh1_pg.C_scaffold_2000543
Melampsora laricis populina
fgenesh1_pg.C_scaffold_2000543
I
0.720
69770
Aureococcus anophagefferens
69770
I
0.720
PY00093
Plasmodium yoelii
PY00093
N
0.720
PCHAS_021050
Plasmodium chabaudi
PCHAS_021050
N
0.720
PBANKA_021210
Plasmodium berghei
PBANKA_021210
N
0.720
PF07_0117
Plasmodium falciparum
PF07_0117
N
0.720
PKH_021240
Plasmodium knowlesi
PKH_021240
N
0.720
PVX_081705
Plasmodium vivax
PVX_081705
N
0.720
ARB_05709
Arthroderma benhamiae
ARB_05709
I
0.720
Ame_R013633
Ailuropoda melanoleuca
Ame_R013633
I
0.720
Bm1_04900
Brugia malayi
Bm1_04900
I
0.720
LOAG_09556
Loa loa
LOAG_09556
I
0.720
HCAG_01136
Histoplasma capsulatum
HCAG_01136
I
0.720
MGYG_00686
Microsporum gypseum
MGYG_00686
I
0.720
CC1G_08524
Coprinopsis cinerea
CC1G_08524
I
0.711
e_gww2.12.213.1
Phanerochaete chrysosporium
e_gww2.12.213.1
I
0.711
estExt_fgenesh1_pg.C_20141
Mycosphaerella fijiensis
estExt_fgenesh1_pg.C_20141
I
0.711
estExt_fgenesh1_pm.C_chr_100036
Mycosphaerella graminicola
estExt_fgenesh1_pm.C_chr_100036
I
0.711
e_gwh1.12.106.1
Laccaria bicolor
e_gwh1.12.106.1
I
0.711
estExt_Genewise1.C_100122
Postia placenta
estExt_Genewise1.C_100122
I
0.711
CPSG_04829
Coccidioides posadasii
CPSG_04829
I
0.711
FVEG_06185
Fusarium verticillioides
FVEG_06185
I
0.711
UREG_00217
Uncinocarpus reesii
UREG_00217
I
0.711
FOXG_08491
Fusarium oxysporum
FOXG_08491
I
0.711
AGAP011190
Anopheles gambiae
AGAP011190
I
0.711
estExt_Genewise1.C_100430
Trichoderma atroviride
estExt_Genewise1.C_100430
I
0.711
CIMG_00109
Coccidioides immitis
CIMG_00109
I
0.711
estExt_Genewise1.C_10111
Trichoderma reesei
estExt_Genewise1.C_10111
I
0.711
BDBG_06604
Blastomyces dermatitidis
BDBG_06604
I
0.711
BC1G_14334
Botrytis cinerea
BC1G_14334
I
0.711
genemark.2222_g
Pleurotus ostreatus
genemark.2222_g
I
0.711
estExt_Genewise1Plus.C_sca_18_chr2_1_00859
Nectria haematococca
estExt_Genewise1Plus.C_sca_18_chr2_1_00859
I
0.711
fgenesh1_pm.C_scaffold_10000060
Batrachochytrium dendrobatidis
fgenesh1_pm.C_scaffold_10000060
I
0.711
estExt_Genewise1.C_30452
Schizophyllum commune
estExt_Genewise1.C_30452
I
0.711
estExt_Genewise1.C_21511
Trichoderma virens
estExt_Genewise1.C_21511
I
0.711
Q7ZTK4
Xenopus laevis
Q7ZTK4
I
0.707
EIF2S1
Tursiops truncatus
ENSTTRG00000015806
I
0.707
AMAG_01618
Allomyces macrogynus
AMAG_01618
I
0.707
AMAG_04113
Allomyces macrogynus
AMAG_04113
I
0.707
AMSG_04936
Thecamonas trahens
AMSG_04936
I
0.707
AAH46576
Xenopus laevis
AAH46576
I
0.707
XP_001176254.1
Strongylocentrotus purpuratus
XP_001176254.1
I
0.707
ENSCHOG00000009030
Choloepus hoffmanni
ENSCHOG00000009030
I
0.707
estExt_Genewise1Plus.C_2350006
Capitella teleta
estExt_Genewise1Plus.C_2350006
I
0.707
XP_001176396.1
Strongylocentrotus purpuratus
XP_001176396.1
I
0.707
XP_779939.1
Strongylocentrotus purpuratus
XP_779939.1
I
0.707
114622
Helobdella robusta
114622
I
0.707
XP_801812.1
Strongylocentrotus purpuratus
XP_801812.1
I
0.707