CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RBM22
(
Vicugna pacos
)
CCCH ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1)
IPR000571
IPR000504
ENSVPAG00000002066
T00651_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSVPAP00000001908
CCCH ZF
162
184
HICSFWVKGECKRGEECPYRHEK
ENSVPAP00000001908
RRM
246
296
XNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLN
Links
Other
CCCH ZF,RRM
family RBPs
Other
Vicugna pacos
RBPs
40 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RBM22
Macaca mulatta
ENSMMUG00000020683
N
0.820
Rbm22
Mus musculus
ENSMUSG00000024604
N
0.820
RBM22
Meleagris gallopavo
ENSMGAG00000006298
N
0.820
RBM22
Loxodonta africana
ENSLAFG00000006638
N
0.820
RBM22
Homo sapiens
ENSG00000086589
N
0.820
RBM22_CHICK
Gallus gallus
ENSGALG00000004555
N
0.820
RBM22
Oryctolagus cuniculus
ENSOCUG00000011532
N
0.820
ENSOPRG00000008481
Ochotona princeps
ENSOPRG00000008481
N
0.820
RBM22
Taeniopygia guttata
ENSTGUG00000000850
N
0.820
RBM22
Tursiops truncatus
ENSTTRG00000012778
N
0.820
RBM22
Pteropus vampyrus
ENSPVAG00000014231
N
0.820
RBM22
Pan troglodytes
ENSPTRG00000017423
N
0.820
RBM22
Procavia capensis
ENSPCAG00000015091
N
0.820
ENSPPYG00000015955
Pongo pygmaeus
ENSPPYG00000015955
N
0.820
ENSEEUG00000005638
Erinaceus europaeus
ENSEEUG00000005638
N
0.820
RBM22
Gorilla gorilla
ENSGGOG00000012947
N
0.820
ENSCHOG00000004192
Choloepus hoffmanni
ENSCHOG00000004192
N
0.820
Rbm22
Dipodomys ordii
ENSDORG00000005329
N
0.820
RBM22
Canis familiaris
ENSCAFG00000018082
N
0.820
RBM22_BOVIN
Bos taurus
ENSBTAG00000035397
N
0.820
RBM22
Anolis carolinensis
ENSACAG00000014750
N
0.820
RBM22_BOVIN
Bos taurus
ENSBTAG00000030366
N
0.820
RBM22
Callithrix jacchus
ENSCJAG00000020963
N
0.820
ENSCHOG00000013522
Choloepus hoffmanni
ENSCHOG00000013522
N
0.820
RBM22
Dasypus novemcinctus
ENSDNOG00000011166
N
0.820
RBM22
Cavia porcellus
ENSCPOG00000001946
N
0.820
ENSCHOG00000001041
Choloepus hoffmanni
ENSCHOG00000001041
N
0.809
Rbm22
Rattus norvegicus
ENSRNOG00000019235
N
0.809
RBM22
Monodelphis domestica
ENSMODG00000009574
N
0.809
rbm22
Xenopus tropicalis
ENSXETG00000020435
N
0.809
ENSMLUG00000003461
Myotis lucifugus
ENSMLUG00000003461
N
0.809
Q7ZXB5
Xenopus laevis
Q7ZXB5
N
0.798
AAH45067
Xenopus laevis
AAH45067
N
0.798
ENSMODG00000006398
Monodelphis domestica
ENSMODG00000006398
N
0.775
RBM22
Danio rerio
ENSDARG00000010238
N
0.767
RBM22
Ornithorhynchus anatinus
ENSOANG00000002314
N
0.761
RBM22
Oryzias latipes
ENSORLG00000004975
N
0.756
RBM22
Gasterosteus aculeatus
ENSGACG00000018027
N
0.744
RBM22
Takifugu rubripes
ENSTRUG00000004724
N
0.744
ENSMEUG00000009348
Macropus eugenii
ENSMEUG00000009348
N
0.711