gw.351.5.1 (Nematostella vectensis)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		gw.351.5.1 T00982_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw.351.5.1 CCCH ZF 164 186
gw.351.5.1 RRM 235 300

Links

Other CCCH ZF,RRM family RBPs
Other Nematostella vectensis RBPs

41 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
gw.38.22.1 Branchiostoma floridae gw.38.22.1 N 0.787
estExt_fgenesh2_pm.C_1790010 Branchiostoma floridae estExt_fgenesh2_pm.C_1790010 N 0.787
amel4_ncbi_hmm34588 Apis mellifera amel4_ncbi_hmm34588 N 0.742
ISCW021094 Ixodes scapularis ISCW021094 N 0.730
e_gw1.11.24.1 Lottia gigantea e_gw1.11.24.1 N 0.730
GA13140-RA Drosophila pseudoobscura FBgn0073177 N 0.708
CG14641 Drosophila melanogaster FBgn0037220 N 0.708
RBM22 Oryzias latipes ENSORLG00000004975 N 0.708
GG11763 Drosophila erecta FBgn0104058 N 0.708
GF17279 Drosophila ananassae FBgn0094297 N 0.708
GD19696 Drosophila simulans FBgn0191187 N 0.708
GE25369 Drosophila yakuba FBgn0242446 N 0.708
GM10722 Drosophila sechellia FBgn0165668 N 0.708
GL12337 Drosophila persimilis FBgn0149944 N 0.708
RBM22 Procavia capensis ENSPCAG00000015091 N 0.700
ENSPPYG00000015955 Pongo pygmaeus ENSPPYG00000015955 N 0.700
RBM22 Pteropus vampyrus ENSPVAG00000014231 N 0.700
RBM22 Tursiops truncatus ENSTTRG00000012778 N 0.700
RBM22 Taeniopygia guttata ENSTGUG00000000850 N 0.700
ENSOPRG00000008481 Ochotona princeps ENSOPRG00000008481 N 0.700
RBM22 Pan troglodytes ENSPTRG00000017423 N 0.700
Rbm22 Mus musculus ENSMUSG00000024604 N 0.700
ENSCHOG00000013522 Choloepus hoffmanni ENSCHOG00000013522 N 0.700
RBM22 Callithrix jacchus ENSCJAG00000020963 N 0.700
RBM22 Cavia porcellus ENSCPOG00000001946 N 0.700
ENSCHOG00000004192 Choloepus hoffmanni ENSCHOG00000004192 N 0.700
RBM22 Canis familiaris ENSCAFG00000018082 N 0.700
RBM22 Anolis carolinensis ENSACAG00000014750 N 0.700
RBM22_BOVIN Bos taurus ENSBTAG00000030366 N 0.700
RBM22_BOVIN Bos taurus ENSBTAG00000035397 N 0.700
RBM22 Dasypus novemcinctus ENSDNOG00000011166 N 0.700
Rbm22 Dipodomys ordii ENSDORG00000005329 N 0.700
RBM22 Meleagris gallopavo ENSMGAG00000006298 N 0.700
ENSMLUG00000003461 Myotis lucifugus ENSMLUG00000003461 N 0.700
RBM22 Macaca mulatta ENSMMUG00000020683 N 0.700
RBM22 Loxodonta africana ENSLAFG00000006638 N 0.700
RBM22 Gorilla gorilla ENSGGOG00000012947 N 0.700
ENSEEUG00000005638 Erinaceus europaeus ENSEEUG00000005638 N 0.700
RBM22 Homo sapiens ENSG00000086589 N 0.700
RBM22_CHICK Gallus gallus ENSGALG00000004555 N 0.700
RBM22 Oryctolagus cuniculus ENSOCUG00000011532 N 0.700