CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TESG_04667
(
Trichophyton tonsurans
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
TESG_04667
T01671_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TESG_04667T0
CCCH ZF
41
66
SDVPVCKAYREGHCPLGPLCAERHPT
TESG_04667T0
CCCH ZF
87
102
LGLCKKGLKCEYLHEY
TESG_04667T0
CCCH ZF
105
131
RRMPECQSFSRNGFCPNGDDCLYQHLS
TESG_04667T0
CCCH ZF
135
154
KLPQCEHYDQGFCPLGPICA
TESG_04667T0
CCCH ZF
159
179
RRKLCRFYLAGFCPAGKTCTE
Links
Other
CCCH ZF
family RBPs
Other
Trichophyton tonsurans
RBPs
17 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MGYG_02843
Microsporum gypseum
MGYG_02843
N
0.940
TRV_05203
Trichophyton verrucosum
TRV_05203
N
0.940
TEQG_00763
Trichophyton equinum
TEQG_00763
N
0.940
ARB_00210
Arthroderma benhamiae
ARB_00210
N
0.940
TERG_06924
Trichophyton rubrum
TERG_06924
N
0.940
MCYG_05740
Microsporum canis
MCYG_05740
N
0.906
ATEG_01945
Aspergillus terreus
CADATEAG00008580
N
0.727
AO090005000813
Aspergillus oryzae
CADAORAG00002768
N
0.723
AFLA_080640
Aspergillus flavus
CADAFLAG00000846
N
0.723
CIMG_04751
Coccidioides immitis
CIMG_04751
N
0.711
An01g05350
Aspergillus niger
CADANGAG00000527
N
0.711
NFIA_021820
Neosartorya fischeri
CADNFIAG00001277
N
0.711
gw1.00129.565.1
Aspergillus carbonarius
gw1.00129.565.1
N
0.702
UREG_06760
Uncinocarpus reesii
UREG_06760
N
0.702
AFUA_1G02810
Aspergillus fumigatus
CADAFUAG00008733
N
0.702
Pc22g25210
Penicillium chrysogenum
Pc22g25210
N
0.702
CPSG_07754
Coccidioides posadasii
CPSG_07754
N
0.702