MBNL1 (Ornithorhynchus anatinus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSOANG00000007992 T03026_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
MBNL1
M320_0.6 		Homo sapiens YYYGCUKY; YGCY SELEX
Cook et al.(2011)
669_20071745 		0.792
MBNL1
M037_0.6 		Homo sapiens GCUUGC RNAcompete
Ray et al.(2013)
RNCMPT00038 		0.792
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSOANP00000012712 CCCH ZF 19 37
ENSOANP00000012712 CCCH ZF 50 69
ENSOANP00000012712 CCCH ZF 176 202
ENSOANP00000012712 CCCH ZF 213 236
ENSOANP00000012713 CCCH ZF 19 37
ENSOANP00000012713 CCCH ZF 50 69
ENSOANP00000012713 CCCH ZF 110 135
ENSOANP00000012713 CCCH ZF 146 169

Links

Other CCCH ZF family RBPs
Other Ornithorhynchus anatinus RBPs

100 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
MBNL1 Canis familiaris ENSCAFG00000008603 I 0.792
MBNL1 Cavia porcellus ENSCPOG00000011516 I 0.792
LOC100392264 Callithrix jacchus ENSCJAG00000001054 I 0.792
MBNL1 Vicugna pacos ENSVPAG00000006162 I 0.792
MBNL1 Taeniopygia guttata ENSTGUG00000011341 I 0.792
MBNL1 Tarsius syrichta ENSTSYG00000010491 I 0.792
MBNL1 Tursiops truncatus ENSTTRG00000009991 I 0.792
MBNL1 Dasypus novemcinctus ENSDNOG00000012815 I 0.792
LOC100050018 Equus caballus ENSECAG00000024349 I 0.792
MBNL1 Macaca mulatta ENSMMUG00000015910 I 0.792
MBNL1 Monodelphis domestica ENSMODG00000015838 I 0.792
Mbnl1 Mus musculus ENSMUSG00000027763 I 0.792
MBNL1 Loxodonta africana ENSLAFG00000017683 I 0.792
MBNL1 Gorilla gorilla ENSGGOG00000009430 I 0.792
MBNL1 Erinaceus europaeus ENSEEUG00000009449 I 0.792
MBNL1 Homo sapiens ENSG00000152601 D 0.792
MBNL1_CHICK Gallus gallus ENSGALG00000010361 I 0.792
MBNL1 Spermophilus tridecemlineatus ENSSTOG00000009457 I 0.792
MBNL1 Anolis carolinensis ENSACAG00000008014 I 0.792
MBNL1 Ochotona princeps ENSOPRG00000009633 I 0.792
MBNL1 Oryctolagus cuniculus ENSOCUG00000007601 I 0.792
MBNL1 Pan troglodytes ENSPTRG00000015542 I 0.792
MBNL1 Pteropus vampyrus ENSPVAG00000002760 I 0.792
ENSPPYG00000014218 Pongo pygmaeus ENSPPYG00000014218 I 0.792
MBNL1 Oryzias latipes ENSORLG00000005925 I 0.781
mbnl1 Xenopus tropicalis ENSXETG00000021655 I 0.781
MBNL1 Myotis lucifugus ENSMLUG00000014029 I 0.781
MBNL1 Takifugu rubripes ENSTRUG00000001892 I 0.771
MBNL1 Gasterosteus aculeatus ENSGACG00000015003 I 0.760
MBNL1 Oryzias latipes ENSORLG00000015858 I 0.760
MBNL1 Macropus eugenii ENSMEUG00000006617 I 0.758
MBNL1 Takifugu rubripes ENSTRUG00000013858 I 0.750
MBNL1 Tetraodon nigroviridis ENSTNIG00000003878 I 0.750
ENSTRUG00000017351 Takifugu rubripes ENSTRUG00000017351 I 0.747
MBNL2 Ornithorhynchus anatinus ENSOANG00000014911 I 0.740
Mbnl2 Rattus norvegicus ENSRNOG00000010737 I 0.740
MBNL2 Cavia porcellus ENSCPOG00000010320 I 0.740
ENSPPYG00000005456 Pongo pygmaeus ENSPPYG00000005456 I 0.740
Mbnl2 Mus musculus ENSMUSG00000022139 I 0.740
MBNL2 Canis familiaris ENSCAFG00000005523 I 0.740
MBNL2 Procavia capensis ENSPCAG00000005151 I 0.740
MBNL2 Choloepus hoffmanni ENSCHOG00000000049 I 0.740
MBNL2 Loxodonta africana ENSLAFG00000014497 I 0.740
MBNL2 Homo sapiens ENSG00000139793 I 0.740
A5PKK4_BOVIN Bos taurus ENSBTAG00000018313 I 0.740
MBNL2 Ochotona princeps ENSOPRG00000007427 I 0.740
MBNL2 Echinops telfairi ENSETEG00000003784 I 0.740
MBNL1 Gasterosteus aculeatus ENSGACG00000010253 I 0.740
MBNL2 Gorilla gorilla ENSGGOG00000008349 I 0.740
MBNL2 Oryctolagus cuniculus ENSOCUG00000000220 I 0.740
LOC100403733 Callithrix jacchus ENSCJAG00000004294 I 0.740
MBNL2 Tursiops truncatus ENSTTRG00000008491 I 0.740
MBNL2 Pan troglodytes ENSPTRG00000005982 I 0.740
MBNL2 Spermophilus tridecemlineatus ENSSTOG00000013149 I 0.740
MBNL2 Sus scrofa ENSSSCG00000009505 I 0.740
MBNL2 Sorex araneus ENSSARG00000002868 I 0.740
MBNL2 Vicugna pacos ENSVPAG00000010696 I 0.740
MBNL2 Pteropus vampyrus ENSPVAG00000003263 I 0.740
Ame_R002664 Ailuropoda melanoleuca Ame_R002664 I 0.740
MBNL3 Macropus eugenii ENSMEUG00000001183 I 0.729
MBNL3 Taeniopygia guttata ENSTGUG00000002999 I 0.729
mbnl3 Xenopus tropicalis ENSXETG00000005409 I 0.729
MBNL3 Meleagris gallopavo ENSMGAG00000003064 I 0.729
MBNL2 Taeniopygia guttata ENSTGUG00000011104 I 0.729
MBNL2 Monodelphis domestica ENSMODG00000008566 I 0.729
MBNL3 Ornithorhynchus anatinus ENSOANG00000011697 I 0.729
MBNL3 Anolis carolinensis ENSACAG00000009557 I 0.729
MBNL3 Monodelphis domestica ENSMODG00000015304 I 0.729
A5HMN7_CHICK Gallus gallus ENSGALG00000006066 I 0.729
MBNL2 Meleagris gallopavo ENSMGAG00000014904 I 0.729
A3F958_CHICK Gallus gallus ENSGALG00000016890 I 0.729
MBNL2 Anolis carolinensis ENSACAG00000000969 I 0.729
MBNL2 Tarsius syrichta ENSTSYG00000004574 I 0.729
MBNL3 Macaca mulatta ENSMMUG00000003071 I 0.719
MBNL3 Myotis lucifugus ENSMLUG00000016240 I 0.719
MBNL3 Spermophilus tridecemlineatus ENSSTOG00000006715 I 0.719
MBNL2 Erinaceus europaeus ENSEEUG00000006209 I 0.719
LOC100054316 Equus caballus ENSECAG00000021076 I 0.719
ENSPPYG00000020726 Pongo pygmaeus ENSPPYG00000020726 I 0.719
mbnl2 Danio rerio ENSDARG00000018460 I 0.719
MBNL3 Sorex araneus ENSSARG00000006397 I 0.719
MBNL3 Vicugna pacos ENSVPAG00000004743 I 0.719
MBNL3 Dasypus novemcinctus ENSDNOG00000016518 I 0.719
MBN2A_FUGRU Takifugu rubripes ENSTRUG00000010220 I 0.719
MBNL3 Canis familiaris ENSCAFG00000018841 I 0.719
ENSGACG00000015105 Gasterosteus aculeatus ENSGACG00000015105 I 0.719
MBNL3 Homo sapiens ENSG00000076770 I 0.719
MBNL3 Bos taurus ENSBTAG00000014088 I 0.719
ENSTNIG00000013977 Tetraodon nigroviridis ENSTNIG00000013977 I 0.719
ENSGACG00000004222 Gasterosteus aculeatus ENSGACG00000004222 I 0.719
MBNL3 Gorilla gorilla ENSGGOG00000007756 I 0.719
ENSORLG00000005419 Oryzias latipes ENSORLG00000005419 I 0.719
MBNL3 Loxodonta africana ENSLAFG00000011822 I 0.719
MBNL3 Oryctolagus cuniculus ENSOCUG00000014979 I 0.719
MBNL2 Tupaia belangeri ENSTBEG00000005178 I 0.716
LOC100397507 Callithrix jacchus ENSCJAG00000004080 I 0.708
MBNL3 Tursiops truncatus ENSTTRG00000016841 I 0.708
MBNL2 Macropus eugenii ENSMEUG00000016143 I 0.705
Mbnl3 Rattus norvegicus ENSRNOG00000002487 I 0.701