Mbnl3 (Rattus norvegicus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSRNOG00000002487 T03302_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
MBNL1
M320_0.6 		Homo sapiens YYYGCUKY; YGCY SELEX
Cook et al.(2011)
669_20071745 		0.845
MBNL1
M037_0.6 		Homo sapiens GCUUGC RNAcompete
Ray et al.(2013)
RNCMPT00038 		0.845
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000039018 CCCH ZF 17 41
ENSRNOP00000039018 CCCH ZF 53 73
ENSRNOP00000039018 CCCH ZF 175 201
ENSRNOP00000039018 CCCH ZF 212 235

Links

Other CCCH ZF family RBPs
Other Rattus norvegicus RBPs

111 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Mbnl3 Dipodomys ordii ENSDORG00000012854 I 0.928
Mbnl3 Mus musculus ENSMUSG00000036109 I 0.918
MBNL3 Oryctolagus cuniculus ENSOCUG00000014979 I 0.887
MBNL3 Macaca mulatta ENSMMUG00000003071 I 0.876
ENSPPYG00000020726 Pongo pygmaeus ENSPPYG00000020726 I 0.876
MBNL3 Homo sapiens ENSG00000076770 I 0.876
MBNL3 Anolis carolinensis ENSACAG00000009557 I 0.876
MBNL3 Loxodonta africana ENSLAFG00000011822 I 0.876
MBNL3 Gorilla gorilla ENSGGOG00000007756 I 0.876
LOC100054316 Equus caballus ENSECAG00000021076 I 0.866
MBNL3 Macropus eugenii ENSMEUG00000001183 I 0.866
MBNL3 Bos taurus ENSBTAG00000014088 I 0.866
MBNL3 Myotis lucifugus ENSMLUG00000016240 I 0.866
MBNL3 Spermophilus tridecemlineatus ENSSTOG00000006715 I 0.866
MBNL3 Ornithorhynchus anatinus ENSOANG00000011697 I 0.866
A5HMN7_CHICK Gallus gallus ENSGALG00000006066 I 0.866
MBNL3 Meleagris gallopavo ENSMGAG00000003064 I 0.866
MBNL3 Taeniopygia guttata ENSTGUG00000002999 I 0.866
LOC100397507 Callithrix jacchus ENSCJAG00000004080 I 0.866
MBNL3 Vicugna pacos ENSVPAG00000004743 I 0.866
MBNL3 Canis familiaris ENSCAFG00000018841 I 0.866
MBNL3 Monodelphis domestica ENSMODG00000015304 I 0.866
mbnl3 Xenopus tropicalis ENSXETG00000005409 I 0.866
mbnl1 Xenopus tropicalis ENSXETG00000021655 I 0.856
MBNL1 Myotis lucifugus ENSMLUG00000014029 I 0.856
MBNL1 Monodelphis domestica ENSMODG00000015838 I 0.856
MBNL3 Sorex araneus ENSSARG00000006397 I 0.856
MBNL3 Tursiops truncatus ENSTTRG00000016841 I 0.856
MBNL1 Dasypus novemcinctus ENSDNOG00000012815 I 0.845
MBNL1 Oryctolagus cuniculus ENSOCUG00000007601 I 0.845
MBNL3 Dasypus novemcinctus ENSDNOG00000016518 I 0.845
MBNL1 Cavia porcellus ENSCPOG00000011516 I 0.845
MBNL1 Homo sapiens ENSG00000152601 D 0.845
Mbnl1 Mus musculus ENSMUSG00000027763 I 0.845
MBNL1 Gorilla gorilla ENSGGOG00000009430 I 0.845
MBNL1 Loxodonta africana ENSLAFG00000017683 I 0.845
MBNL1_CHICK Gallus gallus ENSGALG00000010361 I 0.845
MBNL3 Gasterosteus aculeatus ENSGACG00000017015 I 0.845
MBNL1 Erinaceus europaeus ENSEEUG00000009449 I 0.845
MBNL1 Macaca mulatta ENSMMUG00000015910 I 0.845
LOC100050018 Equus caballus ENSECAG00000024349 I 0.845
LOC100392264 Callithrix jacchus ENSCJAG00000001054 I 0.845
MBNL1 Vicugna pacos ENSVPAG00000006162 I 0.845
MBNL3 Tetraodon nigroviridis ENSTNIG00000016812 I 0.845
MBNL1 Pteropus vampyrus ENSPVAG00000002760 I 0.845
MBNL1 Tursiops truncatus ENSTTRG00000009991 I 0.845
MBNL1 Tarsius syrichta ENSTSYG00000010491 I 0.845
MBNL1 Taeniopygia guttata ENSTGUG00000011341 I 0.845
MBNL3_FUGRU Takifugu rubripes ENSTRUG00000012666 I 0.845
ENSPPYG00000014218 Pongo pygmaeus ENSPPYG00000014218 I 0.845
Ame_R011226 Ailuropoda melanoleuca Ame_R011226 I 0.845
MBNL1 Pan troglodytes ENSPTRG00000015542 I 0.845
MBNL1 Canis familiaris ENSCAFG00000008603 I 0.845
MBNL1 Ochotona princeps ENSOPRG00000009633 I 0.845
MBNL1 Spermophilus tridecemlineatus ENSSTOG00000009457 I 0.845
MBNL1 Anolis carolinensis ENSACAG00000008014 I 0.845
MBNL1 Oryzias latipes ENSORLG00000015858 I 0.835
MBNL1 Oryzias latipes ENSORLG00000005925 I 0.835
MBNL3 Microcebus murinus ENSMICG00000017340 I 0.835
MBNL1 Takifugu rubripes ENSTRUG00000001892 I 0.825
MBNL1 Gasterosteus aculeatus ENSGACG00000015003 I 0.825
MBNL1 Gasterosteus aculeatus ENSGACG00000010253 I 0.825
MBNL3 Pteropus vampyrus ENSPVAG00000006115 I 0.816
MBNL1 Tetraodon nigroviridis ENSTNIG00000003878 I 0.814
MBNL1 Macropus eugenii ENSMEUG00000006617 I 0.814
mbnl3 Danio rerio ENSDARG00000016085 I 0.814
MBNL1 Takifugu rubripes ENSTRUG00000013858 I 0.814
MBNL2 Meleagris gallopavo ENSMGAG00000014904 I 0.804
MBNL2 Taeniopygia guttata ENSTGUG00000011104 I 0.804
ENSGACG00000015105 Gasterosteus aculeatus ENSGACG00000015105 I 0.804
mbnl2 Danio rerio ENSDARG00000018460 I 0.804
MBNL2 Anolis carolinensis ENSACAG00000000969 I 0.804
ENSORLG00000005419 Oryzias latipes ENSORLG00000005419 I 0.804
MBN2A_FUGRU Takifugu rubripes ENSTRUG00000010220 I 0.804
A3F958_CHICK Gallus gallus ENSGALG00000016890 I 0.804
MBNL2 Monodelphis domestica ENSMODG00000008566 I 0.794
MBNL2 Pteropus vampyrus ENSPVAG00000003263 I 0.794
MBNL2 Procavia capensis ENSPCAG00000005151 I 0.794
MBNL2 Ochotona princeps ENSOPRG00000007427 I 0.794
ENSPPYG00000005456 Pongo pygmaeus ENSPPYG00000005456 I 0.794
MBNL2 Ornithorhynchus anatinus ENSOANG00000014911 I 0.794
MBNL2 Pan troglodytes ENSPTRG00000005982 I 0.794
MBNL2 Oryctolagus cuniculus ENSOCUG00000000220 I 0.794
MBNL2 Echinops telfairi ENSETEG00000003784 I 0.794
Ame_R002664 Ailuropoda melanoleuca Ame_R002664 I 0.794
A5PKK4_BOVIN Bos taurus ENSBTAG00000018313 I 0.794
LOC100403733 Callithrix jacchus ENSCJAG00000004294 I 0.794
MBNL2 Vicugna pacos ENSVPAG00000010696 I 0.794
MBNL2 Tursiops truncatus ENSTTRG00000008491 I 0.794
MBNL2 Sorex araneus ENSSARG00000002868 I 0.794
MBNL2 Sus scrofa ENSSSCG00000009505 I 0.794
MBNL2 Spermophilus tridecemlineatus ENSSTOG00000013149 I 0.794
MBNL2 Cavia porcellus ENSCPOG00000010320 I 0.794
MBNL2 Canis familiaris ENSCAFG00000005523 I 0.794
MBNL2 Homo sapiens ENSG00000139793 I 0.794
MBNL2 Gorilla gorilla ENSGGOG00000008349 I 0.794
MBNL2 Loxodonta africana ENSLAFG00000014497 I 0.794
ENSTRUG00000017351 Takifugu rubripes ENSTRUG00000017351 I 0.784
MBNL2 Tarsius syrichta ENSTSYG00000004574 I 0.784
Mbnl2 Mus musculus ENSMUSG00000022139 I 0.784
Mbnl2 Rattus norvegicus ENSRNOG00000010737 I 0.784
MBNL2 Choloepus hoffmanni ENSCHOG00000000049 I 0.784
ENSTNIG00000013977 Tetraodon nigroviridis ENSTNIG00000013977 I 0.773
ENSGACG00000004222 Gasterosteus aculeatus ENSGACG00000004222 I 0.773
MBNL2 Erinaceus europaeus ENSEEUG00000006209 I 0.773
MBNL3 Oryzias latipes ENSORLG00000002183 I 0.773
MBNL2 Macropus eugenii ENSMEUG00000016143 I 0.763
MBNL2 Tupaia belangeri ENSTBEG00000005178 I 0.763
MBNL2 Myotis lucifugus ENSMLUG00000010920 I 0.742
XP_001194015.1 Strongylocentrotus purpuratus XP_001194015.1 I 0.732
MBNL1 Ornithorhynchus anatinus ENSOANG00000007992 I 0.701