MDP0000310338 (Malus x domestica)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 MDP0000310338 T06364_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000310338 CCCH ZF 90 116
MDP0000310338 CCCH ZF 136 161
MDP0000310338 CCCH ZF 168 194
MDP0000310338 CCCH ZF 276 302

Links

Other CCCH ZF family RBPs
Other Malus x domestica RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava24680.valid.m1 Manihot esculenta cassava24680.valid.m1 N 0.907
Glyma02g17250.1 Glycine max Glyma02g17250.1 N 0.879
B9HSD6_POPTR Populus trichocarpa POPTR_0010s02320 N 0.776
B9N500_POPTR Populus trichocarpa POPTR_0008s22730 N 0.776
Medtr8g139280 Medicago truncatula Medtr8g139280 N 0.738
BRADI2G09350 Brachypodium distachyon BRADI2G09350 N 0.722
AT2G47850 Arabidopsis thaliana AT2G47850-TAIR-G N 0.722